Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:105474470-105616040

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zdhhc1 8 105472423 to 105496902 24479 - protein coding gene zinc finger, DHHC domain containing 1
Tssr82658 8 105482848 to 105482861 13 - TSS region transcription start site region 82658
Tssr82659 8 105494659 to 105494675 16 - TSS region transcription start site region 82659
Cpgi20936 8 105496494 to 105497314 820 CpG island CpG island 20936
Tssr82660 8 105496975 to 105496982 7 - TSS region transcription start site region 82660
Tssr82661 8 105497023 to 105497068 45 - TSS region transcription start site region 82661
Tssr82662 8 105497089 to 105497094 5 - TSS region transcription start site region 82662
Tssr79149 8 105503198 to 105503202 4 + TSS region transcription start site region 79149
Gm8838 8 105503406 to 105503946 540 + pseudogene predicted gene 8838
Cpgi20937 8 105518339 to 105519327 988 CpG island CpG island 20937
Tssr79150 8 105518736 to 105518753 17 + TSS region transcription start site region 79150
Hsd11b2 8 105518755 to 105523988 5233 + protein coding gene hydroxysteroid 11-beta dehydrogenase 2
Tssr79151 8 105518884 to 105518917 33 + TSS region transcription start site region 79151
Tssr79152 8 105518929 to 105518947 18 + TSS region transcription start site region 79152
Atp6v0d1 8 105524470 to 105566040 41570 - protein coding gene ATPase, H+ transporting, lysosomal V0 subunit D1
Tssr82663 8 105525357 to 105525371 14 - TSS region transcription start site region 82663
Tssr82664 8 105525380 to 105525394 14 - TSS region transcription start site region 82664
Tssr82665 8 105529376 to 105529415 39 - TSS region transcription start site region 82665
D8Mit198 8 105541565 to 105541762 197 DNA segment DNA segment, Chr 8, Massachusetts Institute of Technology 198
Tssr82666 8 105549621 to 105549640 19 - TSS region transcription start site region 82666
D8Dcr39 8 105561758 to 105561859 101 DNA segment DNA Segment, Chr 8, Derry C. Roopenian 39
Cpgi20938 8 105565355 to 105567089 1734 CpG island CpG island 20938
Tssr82667 8 105565906 to 105565914 8 - TSS region transcription start site region 82667
Tssr82668 8 105565921 to 105565947 26 - TSS region transcription start site region 82668
Tssr82669 8 105565957 to 105565982 25 - TSS region transcription start site region 82669
Tssr82670 8 105565985 to 105566071 86 - TSS region transcription start site region 82670
Tssr79153 8 105566171 to 105566187 16 + TSS region transcription start site region 79153
Gm38250 8 105566324 to 105578109 11785 + antisense lncRNA gene predicted gene, 38250
Agrp 8 105566695 to 105579845 13150 - protein coding gene agouti related neuropeptide
Tssr82671 8 105567632 to 105567648 16 - TSS region transcription start site region 82671
Tssr82672 8 105579855 to 105579864 9 - TSS region transcription start site region 82672
Gm45855 8 105585321 to 105586200 879 - pseudogene predicted gene 45855
Tssr79154 8 105594069 to 105594088 19 + TSS region transcription start site region 79154
Tssr79155 8 105595093 to 105595102 9 + TSS region transcription start site region 79155
Tssr79156 8 105595134 to 105595156 22 + TSS region transcription start site region 79156
Tssr79157 8 105595194 to 105595203 9 + TSS region transcription start site region 79157
Tssr79158 8 105602824 to 105602826 2 + TSS region transcription start site region 79158
Cpgi20939 8 105604667 to 105606026 1359 CpG island CpG island 20939
Tssr79159 8 105605022 to 105605040 18 + TSS region transcription start site region 79159
Tssr79160 8 105605041 to 105605056 15 + TSS region transcription start site region 79160
Tssr79161 8 105605220 to 105605306 86 + TSS region transcription start site region 79161
Ripor1 8 105605255 to 105622219 16964 + protein coding gene RHO family interacting cell polarization regulator 1
Cpgi20940 8 105606502 to 105606719 217 CpG island CpG island 20940
Tssr82673 8 105606682 to 105606693 11 - TSS region transcription start site region 82673
Tssr82674 8 105606698 to 105606710 12 - TSS region transcription start site region 82674
Cpgi20941 8 105613195 to 105613562 367 CpG island CpG island 20941
Tssr79162 8 105613226 to 105613243 17 + TSS region transcription start site region 79162
Tssr79163 8 105613246 to 105613266 20 + TSS region transcription start site region 79163
Cpgi20942 8 105613822 to 105614614 792 CpG island CpG island 20942
Mir1966 8 105615466 to 105615573 107 + miRNA gene microRNA 1966