Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 8:104604003-104871634

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cdh16 8 104601915 to 104624396 22481 - protein coding gene cadherin 16
Tssr82615 8 104609341 to 104609362 21 - TSS region transcription start site region 82615
Tssr82616 8 104609364 to 104609375 11 - TSS region transcription start site region 82616
Tssr82617 8 104623901 to 104623913 12 - TSS region transcription start site region 82617
Tssr82618 8 104624188 to 104624203 15 - TSS region transcription start site region 82618
Tssr82619 8 104624210 to 104624239 29 - TSS region transcription start site region 82619
Tssr82620 8 104624249 to 104624262 13 - TSS region transcription start site region 82620
Tssr82621 8 104624266 to 104624306 40 - TSS region transcription start site region 82621
Tssr79070 8 104624511 to 104624518 7 + TSS region transcription start site region 79070
Tssr79071 8 104624522 to 104624533 11 + TSS region transcription start site region 79071
Tssr79072 8 104624566 to 104624576 10 + TSS region transcription start site region 79072
Rrad 8 104628070 to 104631327 3257 - protein coding gene Ras-related associated with diabetes
Cpgi20908 8 104630428 to 104631455 1027 CpG island CpG island 20908
Tssr82622 8 104631281 to 104631295 14 - TSS region transcription start site region 82622
Tssr82623 8 104631312 to 104631319 7 - TSS region transcription start site region 82623
Gm33023 8 104631400 to 104635841 4441 + antisense lncRNA gene predicted gene, 33023
Ciao2b 8 104639839 to 104641728 1889 - protein coding gene cytosolic iron-sulfur assembly component 2B
Cpgi20909 8 104640792 to 104642297 1505 CpG island CpG island 20909
Tssr82624 8 104641666 to 104641736 70 - TSS region transcription start site region 82624
1700082M22Rik 8 104641807 to 104658558 16751 + antisense lncRNA gene RIKEN cDNA 1700082M22 gene
Tlm 8 104661827 to 104665081 3254 unclassified gene T lymphoma oncogene
Gm7208 8 104675318 to 104681600 6282 - pseudogene predicted gene 7208
Gm5159 8 104701705 to 104707621 5916 - pseudogene predicted gene 5159
Tssr82625 8 104708269 to 104708272 3 - TSS region transcription start site region 82625
Gm44328 8 104709372 to 104709446 74 - miRNA gene predicted gene, 44328
9230110F11Rik 8 104711249 to 104718260 7011 + unclassified gene RIKEN cDNA 9230110F11 gene
Tssr79073 8 104733997 to 104734024 27 + TSS region transcription start site region 79073
Ces2a 8 104734003 to 104741634 7631 + protein coding gene carboxylesterase 2A
Tssr79074 8 104755710 to 104755713 3 + TSS region transcription start site region 79074
Gm6831 8 104755779 to 104764069 8290 + pseudogene predicted gene 6831
Gm18475 8 104757654 to 104758506 852 - pseudogene predicted gene, 18475
Gm45782 8 104785828 to 104787612 1784 + pseudogene predicted gene 45782
4932416K20Rik 8 104794802 to 104798787 3985 + lincRNA gene RIKEN cDNA 4932416K20 gene
Tssr2676 8 104795236 to 104795238 2 + TSS region transcription start site region 2676
Ces2b 8 104831572 to 104840093 8521 + protein coding gene carboxyesterase 2B
Tssr79075 8 104831591 to 104831598 7 + TSS region transcription start site region 79075
Tssr79076 8 104831601 to 104831609 8 + TSS region transcription start site region 79076
Tssr79077 8 104831634 to 104831666 32 + TSS region transcription start site region 79077
Tssr79078 8 104842038 to 104842044 6 + TSS region transcription start site region 79078
Gm33715 8 104844370 to 104845927 1557 - pseudogene predicted gene, 33715
Matr3-ps2 8 104845636 to 104846879 1243 - pseudogene matrin 3, pseudogene 2
Tssr79079 8 104847061 to 104847079 18 + TSS region transcription start site region 79079
Ces2c 8 104847068 to 104854483 7415 + protein coding gene carboxylesterase 2C
Gm33218 8 104853178 to 104868998 15820 - lncRNA gene predicted gene, 33218
Ces2d-ps 8 104867488 to 104873861 6373 + pseudogene carboxylesterase 2D, pseudogene
Gm33141 8 104869099 to 104888372 19273 - lncRNA gene predicted gene, 33141