MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 8:104112747-104172760

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdh5	8	104101625 to 104144511	42886	+	protein coding gene	cadherin 5
Tssr79027	8	104112968 to 104112980	12	+	TSS region	transcription start site region 79027
D8Mit212	8	104120445 to 104120591	146		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 212
Tssr79028	8	104131110 to 104131126	16	+	TSS region	transcription start site region 79028
Tssr79029	8	104133820 to 104133826	6	+	TSS region	transcription start site region 79029
Cpgi20894	8	104142451 to 104142995	544		CpG island	CpG island 20894
Tssr79030	8	104142747 to 104142760	13	+	TSS region	transcription start site region 79030
Tssr79031	8	104142842 to 104142862	20	+	TSS region	transcription start site region 79031
Tssr79032	8	104142977 to 104142989	12	+	TSS region	transcription start site region 79032
Tssr79033	8	104143235 to 104143249	14	+	TSS region	transcription start site region 79033
Tssr79034	8	104144248 to 104144269	21	+	TSS region	transcription start site region 79034
Gm45663	8	104152706 to 104154337	1631	+	unclassified gene	predicted gene 45663
D8Mit352	8	104155198 to 104155317	119		DNA segment	DNA segment, Chr 8, Massachusetts Institute of Technology 352
Cpgi20895	8	104170020 to 104171772	1752		CpG island	CpG island 20895
Bean1	8	104170442 to 104219122	48680	+	protein coding gene	brain expressed, associated with Nedd4, 1
Tssr79035	8	104170538 to 104170612	74	+	TSS region	transcription start site region 79035