MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:99436004-99504022

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gdpd5	7	99381415 to 99460984	79569	+	protein coding gene	glycerophosphodiester phosphodiesterase domain containing 5
Klhl35	7	99466004 to 99474022	8018	+	protein coding gene	kelch-like 35
Tssr68057	7	99466021 to 99466032	11	+	TSS region	transcription start site region 68057
Cpgi19465	7	99467566 to 99467725	159		CpG island	CpG island 19465
Cpgi19466	7	99468000 to 99469300	1300		CpG island	CpG island 19466
Cpgi19467	7	99471667 to 99472005	338		CpG island	CpG island 19467
Rps3	7	99477896 to 99483709	5813	-	protein coding gene	ribosomal protein S3
Tssr73685	7	99478596 to 99478599	3	-	TSS region	transcription start site region 73685
Tssr68058	7	99478881 to 99478916	35	+	TSS region	transcription start site region 68058
Snord15b	7	99479563 to 99479707	144	-	snoRNA gene	small nucleolar RNA, C/D box 14B
Tssr73686	7	99479702 to 99479707	5	-	TSS region	transcription start site region 73686
Tssr73687	7	99480008 to 99480029	21	-	TSS region	transcription start site region 73687
Tssr73688	7	99482323 to 99482334	11	-	TSS region	transcription start site region 73688
Snord15a	7	99482785 to 99482932	147	-	snoRNA gene	small nucleolar RNA, C/D box 15A
Tssr73689	7	99482926 to 99482934	8	-	TSS region	transcription start site region 73689
Cpgi19468	7	99483151 to 99483730	579		CpG island	CpG island 19468
Tssr73690	7	99483645 to 99483654	9	-	TSS region	transcription start site region 73690
n-R5s156	7	99497718 to 99497822	104	+	rRNA gene	nuclear encoded rRNA 5S 156
Gm39056	7	99500464 to 99505945	5481	+	lncRNA gene	predicted gene, 39056