Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:9899257-12400496

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161 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vmn2r-ps51 7 9886278 to 9899743 13465 - pseudogene vomeronasal 2, receptor, pseudogene 51
Vmn2r-ps52 7 9918252 to 9918863 611 - pseudogene vomeronasal 2, receptor, pseudogene 52
Gm45403 7 9918868 to 9919143 275 + pseudogene predicted gene 45403
Gm5888 7 9919307 to 9920301 994 - pseudogene predicted gene 5888
Vmn2r48 7 9927624 to 9953585 25961 - protein coding gene vomeronasal 2, receptor 48
Gm3702 7 9965888 to 9966233 345 - pseudogene predicted gene 3702
Vmn2r49 7 9976245 to 9992139 15894 - protein coding gene vomeronasal 2, receptor 49
Vmn2r50 7 10037235 to 10053178 15943 - protein coding gene vomeronasal 2, receptor 50
Gm6850 7 10074095 to 10075043 948 - pseudogene predicted gene 6850
Vmn2r51 7 10087198 to 10105659 18461 - protein coding gene vomeronasal 2, receptor 51
Vmn2r52 7 10158652 to 10176286 17634 - protein coding gene vomeronasal 2, receptor 52
Gm20679 7 10194461 to 10205677 11216 - pseudogene predicted gene 20679
Vmn1r66 7 10273828 to 10275351 1523 - protein coding gene vomeronasal 1 receptor 66
Vmn1r-ps47 7 10280797 to 10281703 906 - pseudogene vomeronasal 1 receptor, pseudogene 47
Vmn1r-ps48 7 10300490 to 10301375 885 + pseudogene vomeronasal 1 receptor, pseudogene 48
Gm45402 7 10326266 to 10326488 222 - pseudogene predicted gene 45402
Gm45400 7 10344746 to 10351671 6925 + pseudogene predicted gene 45400
Gm45401 7 10355450 to 10356182 732 - pseudogene predicted gene 45401
Nlrp4d 7 10358873 to 10388935 30062 - protein coding gene NLR family, pyrin domain containing 4D
Gm3726 7 10410671 to 10414466 3795 - pseudogene predicted gene 3726
D7Mit306 7 10411588 to 10411701 113 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 306
Vmn1r67 7 10446789 to 10447787 998 + protein coding gene vomeronasal 1 receptor 67
Gm30645 7 10468632 to 10471316 2684 - pseudogene predicted gene, 30645
469O12.R 7 10469089 to 10469336 247 DNA segment DNA segment, 469O12.R
Zik1 7 10487224 to 10495381 8157 - protein coding gene zinc finger protein interacting with K protein 1
Cpgi18311 7 10495028 to 10495595 567 CpG island CpG island 18311
Tssr70617 7 10495322 to 10495401 79 - TSS region transcription start site region 70617
Gm18193 7 10498013 to 10498755 742 - pseudogene predicted gene, 18193
Vmn1r68 7 10527210 to 10528169 959 - protein coding gene vomeronasal 1 receptor 68
Tssr2078 7 10536717 to 10536719 2 + TSS region transcription start site region 2078
Vmn1r-ps49 7 10549557 to 10550435 878 - pseudogene vomeronasal 1 receptor, pseudogene 49
Vmn1r69 7 10579756 to 10581487 1731 - protein coding gene vomeronasal 1 receptor 69
Vmn1r-ps50 7 10604744 to 10605196 452 - pseudogene vomeronasal 1 receptor, pseudogene 50
Vmn1r70 7 10633587 to 10634483 896 + protein coding gene vomeronasal 1 receptor 70
Tssr64467 7 10636801 to 10636804 3 + TSS region transcription start site region 64467
Vmn1r-ps51 7 10650299 to 10650618 319 + pseudogene vomeronasal 1 receptor, pseudogene 51
Gm6900 7 10656479 to 10656820 341 - pseudogene predicted gene 6900
Tssr70618 7 10656968 to 10656977 9 - TSS region transcription start site region 70618
Vmn1r-ps52 7 10666777 to 10667627 850 - pseudogene vomeronasal 1 receptor, pseudogene 52
Tssr64468 7 10687791 to 10687792 1 + TSS region transcription start site region 64468
Nlrp4b 7 10687793 to 10730168 42375 + protein coding gene NLR family, pyrin domain containing 4B
D7Ertd595e 7 10716210 to 10716413 203 DNA segment DNA segment, Chr 7, ERATO Doi 595, expressed
Gm45379 7 10716314 to 10716862 548 + sense intronic lncRNA gene predicted gene 45379
Gm5130 7 10745268 to 10746226 958 + pseudogene predicted gene 5130
Vmn1r71 7 10747502 to 10749538 2036 - protein coding gene vomeronasal 1 receptor 71
Gm45438 7 10780155 to 10780718 563 - pseudogene predicted gene 45438
Zscan4a 7 10794242 to 10799057 4815 - pseudogene zinc finger and SCAN domain containing 4A
Gm18781 7 10805245 to 10806168 923 + pseudogene predicted gene, 18781
Gm7203 7 10810865 to 10821006 10141 + pseudogene predicted gene 7203
Gm4903 7 10845737 to 10846141 404 - pseudogene predicted gene 4903
Gm7836 7 10850763 to 10851194 431 - pseudogene predicted gene 7836
Gm18638 7 10881188 to 10882413 1225 - pseudogene predicted gene, 18638
Zscan4b 7 10900740 to 10905050 4310 - protein coding gene zinc finger and SCAN domain containing 4B
Gm45279 7 10908911 to 10909301 390 + pseudogene predicted gene 45279
Mir297-1 7 10958437 to 10958512 75 - miRNA gene microRNA 297-1
Gm7786 7 10975368 to 10975803 435 + pseudogene predicted gene 7786
Gm7789 7 10988507 to 10995982 7475 - pseudogene predicted pseudogene 7789
Gm18122 7 11001101 to 11001941 840 - pseudogene predicted gene, 18122
Zscan4c 7 11005745 to 11010547 4802 + protein coding gene zinc finger and SCAN domain containing 4C
Gm45327 7 11020329 to 11020893 564 + pseudogene predicted gene 45327
Gm45395 7 11047284 to 11047842 558 - pseudogene predicted gene 45395
Zscan4-ps1 7 11065139 to 11069691 4552 - pseudogene zinc finger and SCAN domain containing 4, pseudogene 1
Gm33601 7 11075671 to 11076631 960 + pseudogene predicted gene, 33601
Gm7151 7 11082883 to 11089602 6719 + pseudogene predicted gene 7151
Gm4157 7 11107677 to 11108355 678 - pseudogene predicted gene 4157
Gm3774 7 11112954 to 11113388 434 - pseudogene predicted gene 3774
Gm38430 7 11149257 to 11150496 1239 - pseudogene predicted gene, 38430
Zscan4d 7 11161374 to 11166159 4785 - protein coding gene zinc finger and SCAN domain containing 4D
Gm42381 7 11168664 to 11315318 146654 + pseudogene predicted gene, 42381
Gm18204 7 11176225 to 11176943 718 + pseudogene predicted gene, 18204
Gm6909 7 11182400 to 11188803 6403 + pseudogene predicted gene 6909
Gm9689 7 11201406 to 11211327 9921 - pseudogene predicted gene 9689
Gm39481 7 11233147 to 11237022 3875 + pseudogene predicted gene, 39481
Gm5996 7 11248404 to 11249121 717 - pseudogene predicted gene 5996
Gm9652 7 11253702 to 11253864 162 - pseudogene predicted gene 9652
Gm19683 7 11284213 to 11285438 1225 - pseudogene predicted gene, 19683
Gm26248 7 11303218 to 11303338 120 - miRNA gene predicted gene, 26248
Zscan4e 7 11306378 to 11310682 4304 - protein coding gene zinc finger and SCAN domain containing 4E
Gm45870 7 11314461 to 11315061 600 + pseudogene predicted gene 45870
Gm23087 7 11350450 to 11350525 75 - miRNA gene predicted gene, 23087
Gm45596 7 11367374 to 11367807 433 + pseudogene predicted gene 45596
Gm45598 7 11380620 to 11387584 6964 - pseudogene predicted gene 45598
Gm18123 7 11393304 to 11394125 821 - pseudogene predicted gene, 18123
Zscan4f 7 11397915 to 11402318 4403 + protein coding gene zinc finger and SCAN domain containing 4F
Gm18639 7 11415356 to 11416608 1252 + pseudogene predicted gene, 18639
Gm9604 7 11443992 to 11444424 432 + pseudogene predicted gene 9604
Gm7839 7 11449014 to 11449686 672 + pseudogene predicted gene 7839
Gm45382 7 11454894 to 11455044 150 - pseudogene predicted gene 45382
Gm7207 7 11460899 to 11468583 7684 - pseudogene predicted gene 7207
Gm45550 7 11473372 to 11474317 945 - pseudogene predicted gene 45550
Gm45551 7 11478208 to 11479567 1359 + pseudogene predicted gene 45551
Gm45549 7 11497020 to 11503996 6976 - pseudogene predicted gene 45549
Gm18124 7 11509861 to 11510566 705 - pseudogene predicted gene, 18124
Tssr64469 7 11514286 to 11514287 1 + TSS region transcription start site region 64469
Zscan4-ps2 7 11514287 to 11518688 4401 + pseudogene zinc finger and SCAN domain containing 4, pseudogene 2
Gm18640 7 11531730 to 11532982 1252 + pseudogene predicted gene, 18640
Gm3816 7 11560389 to 11560821 432 + pseudogene predicted gene 3816
Gm7848 7 11565417 to 11566134 717 + pseudogene predicted gene 7848
Gm7210 7 11586438 to 11593164 6726 - pseudogene predicted gene 7210
Gm45500 7 11599236 to 11600038 802 - pseudogene predicted gene 45500
Zscan4-ps3 7 11609308 to 11614112 4804 + pseudogene zinc finger and SCAN domain containing 4, pseudogene 3
Gm18641 7 11625035 to 11625914 879 + pseudogene predicted gene, 18641
Vmn1r-ps53 7 11653129 to 11654032 903 - pseudogene vomeronasal 1 receptor, pseudogene 53
Gm45283 7 11660820 to 11661447 627 + pseudogene predicted gene 45283
Vmn1r72 7 11669599 to 11679317 9718 - protein coding gene vomeronasal 1 receptor 72
Gm18850 7 11687829 to 11688216 387 - pseudogene predicted gene, 18850
Gm19093 7 11716716 to 11720271 3555 + pseudogene predicted gene, 19093
Vmn1r73 7 11756257 to 11757168 911 + protein coding gene vomeronasal 1 receptor 73
Gm45616 7 11773668 to 11773986 318 - pseudogene predicted gene 45616
Gm45617 7 11774006 to 11774214 208 + pseudogene predicted gene 45617
Vmn1r-ps54 7 11782123 to 11782262 139 + pseudogene vomeronasal 1 receptor, pseudogene 54
Gm6929 7 11845253 to 11845720 467 - pseudogene predicted gene 6929
Vmn1r74 7 11846775 to 11847689 914 + protein coding gene vomeronasal 1 receptor 74
Vmn1r-ps55 7 11853957 to 11854348 391 + pseudogene vomeronasal 1 receptor, pseudogene 55
Gm34779 7 11866593 to 11866855 262 + pseudogene predicted gene, 34779
D7Mit143 7 11867622 to 11867771 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 143
Vmn1r75 7 11880343 to 11881260 917 + protein coding gene vomeronasal 1 receptor 75
Gm18851 7 11890723 to 11900499 9776 - pseudogene predicted gene, 18851
Tssr64470 7 11899932 to 11899937 5 + TSS region transcription start site region 64470
Vmn1r-ps56 7 11911246 to 11912210 964 - pseudogene vomeronasal 1 receptor, pseudogene 56
Tpt1-ps4 7 11915871 to 11916492 621 + pseudogene tumor protein, translationally-controlled, pseudogene 4
Vmn1r76 7 11930311 to 11931285 974 - protein coding gene vomeronasal 1 receptor 76
Gm45387 7 11952422 to 11953403 981 - pseudogene predicted gene 45387
Vmn1r-ps57 7 11965562 to 11965849 287 - pseudogene vomeronasal 1 receptor, pseudogene 57
Gm24414 7 11967150 to 11967256 106 - snRNA gene predicted gene, 24414
Gm3836 7 11970947 to 11972933 1986 + pseudogene predicted gene 3836
Vmn1r-ps58 7 11976950 to 11977789 839 - pseudogene vomeronasal 1 receptor, pseudogene 58
Gm17737 7 11979676 to 11983912 4236 - pseudogene predicted gene, 17737
Tssr70619 7 11988544 to 11988555 11 - TSS region transcription start site region 70619
Tssr70620 7 11988557 to 11988582 25 - TSS region transcription start site region 70620
Cpgi18312 7 11988914 to 11989322 408 CpG island CpG island 18312
Gm45429 7 11991230 to 11991401 171 + pseudogene predicted gene 45429
Vmn1r-ps59 7 11994916 to 11995080 164 + pseudogene vomeronasal 1 receptor, pseudogene 59
Gm18597 7 11996063 to 11996756 693 - pseudogene predicted gene, 18597
Gm17850 7 11997725 to 11999663 1938 - pseudogene predicted gene, 17850
Vmn1r-ps60 7 12005032 to 12005681 649 + pseudogene vomeronasal 1 receptor, pseudogene 60
Gm18854 7 12025451 to 12030404 4953 + pseudogene predicted gene, 18854
Vmn1r77 7 12036846 to 12042219 5373 + protein coding gene vomeronasal 1 receptor 77
Gm10179 7 12085925 to 12086612 687 - pseudogene predicted gene 10179
Vmn1r-ps61 7 12091277 to 12092098 821 + pseudogene vomeronasal 1 receptor, pseudogene 61
Gm45562 7 12101624 to 12105427 3803 - pseudogene predicted gene 45562
Vmn1r-ps62 7 12113259 to 12114076 817 + pseudogene vomeronasal 1 receptor, pseudogene 62
Gm45498 7 12123641 to 12123923 282 + pseudogene predicted gene 45498
Vmn1r-ps63 7 12138326 to 12139311 985 + pseudogene vomeronasal 1 receptor, pseudogene 63
Vmn1r78 7 12152464 to 12153405 941 + protein coding gene vomeronasal 1 receptor 78
Gm45365 7 12157091 to 12157346 255 + pseudogene predicted gene 45365
Vmn1r79 7 12176193 to 12177113 920 + protein coding gene vomeronasal 1 receptor 79
Gm19201 7 12182468 to 12183245 777 - pseudogene predicted gene, 19201
Vmn1r80 7 12192965 to 12193891 926 + protein coding gene vomeronasal 1 receptor 80
Vmn1r-ps64 7 12201702 to 12202356 654 + pseudogene vomeronasal 1 receptor, pseudogene 64
Gm45364 7 12206195 to 12206353 158 - pseudogene predicted gene 45364
Vmn1r-ps65 7 12214595 to 12215545 950 + pseudogene vomeronasal 1 receptor, pseudogene 65
Gm45367 7 12220096 to 12220442 346 - pseudogene predicted gene 45367
Gm4224 7 12221316 to 12225807 4491 + lincRNA gene predicted gene 4224
Vmn1r81 7 12259759 to 12260679 920 - protein coding gene vomeronasal 1 receptor 81
Vmn1r82 7 12304805 to 12305719 914 + protein coding gene vomeronasal 1 receptor 82
Vmn1r83 7 12320250 to 12322128 1878 - protein coding gene vomeronasal 1 receptor 83
Gm23521 7 12358898 to 12359007 109 - miRNA gene predicted gene, 23521
Vmn1r84 7 12361808 to 12362764 956 - protein coding gene vomeronasal 1 receptor 84
Vmn1r-ps66 7 12392272 to 12392883 611 - pseudogene vomeronasal 1 receptor, pseudogene 66
Vmn1r-ps67 7 12399048 to 12399726 678 - pseudogene vomeronasal 1 receptor, pseudogene 67