MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:98176508-98296530

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Capn5	7	98121559 to 98178274	56715	-	protein coding gene	calpain 5
Gm16938	7	98177194 to 98179401	2207	+	lncRNA gene	predicted gene, 16938
Cpgi19442	7	98177862 to 98178305	443		CpG island	CpG island 19442
Tssr73612	7	98178139 to 98178232	93	-	TSS region	transcription start site region 73612
Tssr73613	7	98178254 to 98178267	13	-	TSS region	transcription start site region 73613
Tssr68010	7	98178331 to 98178423	92	+	TSS region	transcription start site region 68010
Tssr73614	7	98178889 to 98178894	5	-	TSS region	transcription start site region 73614
B3gnt6	7	98192415 to 98199475	7060	-	protein coding gene	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
Cpgi19443	7	98193554 to 98194724	1170		CpG island	CpG island 19443
Tssr73615	7	98199505 to 98199521	16	-	TSS region	transcription start site region 73615
E230006M18Rik	7	98206388 to 98210376	3988		unclassified gene	RIKEN cDNA E230006M18 gene
Acer3	7	98213660 to 98309548	95888	-	protein coding gene	alkaline ceramidase 3
Tssr73616	7	98236508 to 98236530	22	-	TSS region	transcription start site region 73616
Tssr73617	7	98272070 to 98272075	5	-	TSS region	transcription start site region 73617
Tssr73618	7	98282392 to 98282404	12	-	TSS region	transcription start site region 73618
Tssr73619	7	98284095 to 98284096	1	-	TSS region	transcription start site region 73619
Tssr73620	7	98291122 to 98291154	32	-	TSS region	transcription start site region 73620