Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:98082392-98482404

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Myo7a 7 98051060 to 98119524 68464 - protein coding gene myosin VIIA
D7Smh12 7 98082901 to 98083125 224 DNA segment DNA segment, Chr 7, St. Mary's Hospital 12
Cpgi19439 7 98084582 to 98084749 167 CpG island CpG island 19439
Tssr73592 7 98085443 to 98085454 11 - TSS region transcription start site region 73592
Tssr73593 7 98085473 to 98085519 46 - TSS region transcription start site region 73593
Tssr73594 7 98096413 to 98096426 13 - TSS region transcription start site region 73594
Tssr73595 7 98097672 to 98097689 17 - TSS region transcription start site region 73595
Cpgi19440 7 98103087 to 98103634 547 CpG island CpG island 19440
Tssr68009 7 98104939 to 98104986 47 + TSS region transcription start site region 68009
Cpgi19441 7 98111200 to 98111640 440 CpG island CpG island 19441
Tssr73596 7 98111431 to 98111445 14 - TSS region transcription start site region 73596
Tssr73597 7 98111452 to 98111461 9 - TSS region transcription start site region 73597
Tssr73598 7 98111462 to 98111476 14 - TSS region transcription start site region 73598
Tssr73599 7 98112618 to 98112636 18 - TSS region transcription start site region 73599
Tssr2335 7 98112730 to 98112739 9 - TSS region transcription start site region 2335
Tssr73600 7 98117755 to 98117766 11 - TSS region transcription start site region 73600
Tssr73601 7 98117772 to 98117810 38 - TSS region transcription start site region 73601
Tssr73602 7 98117817 to 98117833 16 - TSS region transcription start site region 73602
Tssr73603 7 98119428 to 98119437 9 - TSS region transcription start site region 73603
Tssr73604 7 98119482 to 98119502 20 - TSS region transcription start site region 73604
Tssr73605 7 98119517 to 98119527 10 - TSS region transcription start site region 73605
Capn5 7 98121559 to 98178274 56715 - protein coding gene calpain 5
Omp 7 98143359 to 98145447 2088 - protein coding gene olfactory marker protein
Tssr73606 7 98145472 to 98145479 7 - TSS region transcription start site region 73606
Tssr73607 7 98162177 to 98162190 13 - TSS region transcription start site region 73607
Tssr73608 7 98162318 to 98162367 49 - TSS region transcription start site region 73608
Tssr73609 7 98162457 to 98162471 14 - TSS region transcription start site region 73609
Tssr73610 7 98164719 to 98164724 5 - TSS region transcription start site region 73610
Tssr73611 7 98164978 to 98165012 34 - TSS region transcription start site region 73611
Gm16938 7 98177194 to 98179401 2207 + lncRNA gene predicted gene, 16938
Cpgi19442 7 98177862 to 98178305 443 CpG island CpG island 19442
Tssr73612 7 98178139 to 98178232 93 - TSS region transcription start site region 73612
Tssr73613 7 98178254 to 98178267 13 - TSS region transcription start site region 73613
Tssr68010 7 98178331 to 98178423 92 + TSS region transcription start site region 68010
Tssr73614 7 98178889 to 98178894 5 - TSS region transcription start site region 73614
B3gnt6 7 98192415 to 98199475 7060 - protein coding gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
Cpgi19443 7 98193554 to 98194724 1170 CpG island CpG island 19443
Tssr73615 7 98199505 to 98199521 16 - TSS region transcription start site region 73615
E230006M18Rik 7 98206388 to 98210376 3988 unclassified gene RIKEN cDNA E230006M18 gene
Acer3 7 98213660 to 98309548 95888 - protein coding gene alkaline ceramidase 3
Tssr73616 7 98236508 to 98236530 22 - TSS region transcription start site region 73616
Tssr73617 7 98272070 to 98272075 5 - TSS region transcription start site region 73617
Tssr73618 7 98282392 to 98282404 12 - TSS region transcription start site region 73618
Tssr73619 7 98284095 to 98284096 1 - TSS region transcription start site region 73619
Tssr73620 7 98291122 to 98291154 32 - TSS region transcription start site region 73620
Cpgi19444 7 98308775 to 98309836 1061 CpG island CpG island 19444
Tssr73621 7 98309471 to 98309514 43 - TSS region transcription start site region 73621
Tssr73622 7 98321181 to 98321207 26 - TSS region transcription start site region 73622
Tssr68011 7 98334156 to 98334179 23 + TSS region transcription start site region 68011
Tsku 7 98350668 to 98361328 10660 - protein coding gene tsukushi, small leucine rich proteoglycan
Tssr73623 7 98350938 to 98350944 6 - TSS region transcription start site region 73623
Cpgi19445 7 98359868 to 98361642 1774 CpG island CpG island 19445
Tssr73624 7 98360435 to 98360470 35 - TSS region transcription start site region 73624
Tssr73625 7 98361248 to 98361255 7 - TSS region transcription start site region 73625
Tssr73626 7 98361275 to 98361295 20 - TSS region transcription start site region 73626
Tssr73627 7 98361310 to 98361320 10 - TSS region transcription start site region 73627
Tssr73628 7 98361327 to 98361343 16 - TSS region transcription start site region 73628
Tssr73629 7 98361393 to 98361401 8 - TSS region transcription start site region 73629
Tssr73630 7 98361495 to 98361504 9 - TSS region transcription start site region 73630
Tssr68012 7 98371737 to 98371745 8 + TSS region transcription start site region 68012
Tssr73631 7 98379266 to 98379272 6 - TSS region transcription start site region 73631
Gm44507 7 98388091 to 98415624 27533 - lincRNA gene predicted gene 44507
Tssr73632 7 98415622 to 98415625 3 - TSS region transcription start site region 73632
Gm39053 7 98433482 to 98437946 4464 + lncRNA gene predicted gene, 39053
Gm44980 7 98437206 to 98437519 313 - pseudogene predicted gene 44980
Gucy2d 7 98440416 to 98477479 37063 + protein coding gene guanylate cyclase 2d
Tssr68013 7 98455106 to 98455140 34 + TSS region transcription start site region 68013
Gm2926 7 98455260 to 98455498 238 + pseudogene predicted gene 2926
Gm44978 7 98465130 to 98465446 316 - pseudogene predicted gene 44978
Gm38588 7 98481265 to 98486221 4956 + lncRNA gene predicted gene, 38588