Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:96590130-100340446

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606 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
chtl 7 87493929 to 97902584 10408655 heritable phenotypic marker chocolate-like
Tenm4 7 96171246 to 96911093 739847 + protein coding gene teneurin transmembrane protein 4
Tssr67906 7 96593361 to 96593377 16 + TSS region transcription start site region 67906
Gm15414 7 96596652 to 96629069 32417 - antisense lncRNA gene predicted gene 15414
Tssr67907 7 96603474 to 96603513 39 + TSS region transcription start site region 67907
Tssr67908 7 96619094 to 96619099 5 + TSS region transcription start site region 67908
Tssr67909 7 96644113 to 96644135 22 + TSS region transcription start site region 67909
Tssr67910 7 96644138 to 96644178 40 + TSS region transcription start site region 67910
Tssr67911 7 96647637 to 96647686 49 + TSS region transcription start site region 67911
Tssr67912 7 96648090 to 96648111 21 + TSS region transcription start site region 67912
Tssr67913 7 96672678 to 96672681 3 + TSS region transcription start site region 67913
Tssr67914 7 96694804 to 96694816 12 + TSS region transcription start site region 67914
Tssr67915 7 96697478 to 96697491 13 + TSS region transcription start site region 67915
Tssr67916 7 96754802 to 96754806 4 + TSS region transcription start site region 67916
Gm15413 7 96791433 to 96801549 10116 - antisense lncRNA gene predicted gene 15413
Cpgi19419 7 96797275 to 96797556 281 CpG island CpG island 19419
Tssr67917 7 96797293 to 96797341 48 + TSS region transcription start site region 67917
Gm15416 7 96812433 to 96817485 5052 - antisense lncRNA gene predicted gene 15416
Gm44633 7 96813869 to 96818306 4437 - antisense lncRNA gene predicted gene 44633
Tssr67918 7 96825527 to 96825532 5 + TSS region transcription start site region 67918
D7Mit184 7 96843943 to 96844092 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 184
Gm25712 7 96863287 to 96863379 92 - rRNA gene predicted gene, 25712
D7Mit351 7 96901062 to 96901168 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 351
C230038L03Rik 7 96907622 to 96951521 43899 - lncRNA gene RIKEN cDNA C230038L03 gene
Gm22226 7 96919994 to 96920102 108 - snRNA gene predicted gene, 22226
Tssr67919 7 96946874 to 96946902 28 + TSS region transcription start site region 67919
Tssr73565 7 96947033 to 96947042 9 - TSS region transcription start site region 73565
Cpgi19420 7 96951288 to 96952067 779 CpG island CpG island 19420
Nars2 7 96951510 to 97064758 113248 + protein coding gene asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)
Tssr67920 7 96951515 to 96951526 11 + TSS region transcription start site region 67920
Tssr67921 7 96951534 to 96951548 14 + TSS region transcription start site region 67921
Tssr67922 7 96951552 to 96951597 45 + TSS region transcription start site region 67922
Tssr73566 7 96951842 to 96951881 39 - TSS region transcription start site region 73566
Tssr67923 7 96958120 to 96958148 28 + TSS region transcription start site region 67923
Tssr2333 7 97032827 to 97032831 4 + TSS region transcription start site region 2333
Cpgi19421 7 97081234 to 97082885 1651 CpG island CpG island 19421
Tssr73567 7 97081497 to 97081511 14 - TSS region transcription start site region 73567
Tssr67924 7 97081556 to 97081565 9 + TSS region transcription start site region 67924
Tssr67925 7 97081642 to 97081675 33 + TSS region transcription start site region 67925
Tssr67926 7 97081678 to 97081699 21 + TSS region transcription start site region 67926
Tssr67927 7 97081711 to 97081778 67 + TSS region transcription start site region 67927
Gab2 7 97081751 to 97308951 227200 + protein coding gene growth factor receptor bound protein 2-associated protein 2
Tssr67928 7 97081779 to 97081794 15 + TSS region transcription start site region 67928
Tssr67929 7 97081804 to 97081817 13 + TSS region transcription start site region 67929
Tssr73568 7 97082943 to 97082982 39 - TSS region transcription start site region 73568
Tssr73569 7 97083009 to 97083058 49 - TSS region transcription start site region 73569
Tssr67930 7 97083381 to 97083431 50 + TSS region transcription start site region 67930
Tssr67931 7 97090594 to 97090618 24 + TSS region transcription start site region 67931
Tssr67932 7 97090753 to 97090783 30 + TSS region transcription start site region 67932
Tssr67933 7 97091888 to 97091895 7 + TSS region transcription start site region 67933
Tssr67934 7 97098467 to 97098490 23 + TSS region transcription start site region 67934
Tssr67935 7 97101169 to 97101180 11 + TSS region transcription start site region 67935
Tssr67936 7 97101257 to 97101272 15 + TSS region transcription start site region 67936
Tssr67937 7 97101353 to 97101366 13 + TSS region transcription start site region 67937
Tssr67938 7 97101586 to 97101599 13 + TSS region transcription start site region 67938
Tssr67939 7 97101608 to 97101643 35 + TSS region transcription start site region 67939
Tssr67940 7 97111680 to 97111685 5 + TSS region transcription start site region 67940
Tssr67941 7 97129204 to 97129215 11 + TSS region transcription start site region 67941
Tssr67942 7 97129223 to 97129236 13 + TSS region transcription start site region 67942
Tssr67943 7 97131175 to 97131187 12 + TSS region transcription start site region 67943
Tssr67944 7 97131211 to 97131223 12 + TSS region transcription start site region 67944
Tssr67945 7 97132677 to 97132683 6 + TSS region transcription start site region 67945
Tssr67946 7 97133745 to 97133778 33 + TSS region transcription start site region 67946
Tssr67947 7 97133835 to 97133845 10 + TSS region transcription start site region 67947
Tssr67948 7 97138512 to 97138524 12 + TSS region transcription start site region 67948
Tssr67949 7 97139943 to 97139993 50 + TSS region transcription start site region 67949
Tssr67950 7 97140348 to 97140351 3 + TSS region transcription start site region 67950
Tssr67951 7 97148878 to 97148898 20 + TSS region transcription start site region 67951
Tssr67952 7 97162555 to 97162565 10 + TSS region transcription start site region 67952
Tssr67953 7 97162655 to 97162668 13 + TSS region transcription start site region 67953
Tssr67954 7 97177252 to 97177264 12 + TSS region transcription start site region 67954
Tssr67955 7 97190632 to 97190648 16 + TSS region transcription start site region 67955
Tssr73570 7 97210031 to 97210048 17 - TSS region transcription start site region 73570
Tssr67956 7 97210208 to 97210223 15 + TSS region transcription start site region 67956
Tssr67957 7 97210324 to 97210327 3 + TSS region transcription start site region 67957
Tssr73571 7 97211160 to 97211176 16 - TSS region transcription start site region 73571
Tssr73572 7 97211239 to 97211281 42 - TSS region transcription start site region 73572
Tssr67958 7 97211425 to 97211446 21 + TSS region transcription start site region 67958
Tssr67959 7 97211502 to 97211513 11 + TSS region transcription start site region 67959
Tssr67960 7 97245379 to 97245389 10 + TSS region transcription start site region 67960
Tssr67961 7 97254257 to 97254269 12 + TSS region transcription start site region 67961
D7Mit367 7 97265472 to 97265546 74 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 367
Tssr67962 7 97280308 to 97280343 35 + TSS region transcription start site region 67962
Tssr67963 7 97299272 to 97299283 11 + TSS region transcription start site region 67963
Usp35 7 97309380 to 97332020 22640 - protein coding gene ubiquitin specific peptidase 35
Cpgi19422 7 97325077 to 97326032 955 CpG island CpG island 19422
Cpgi19423 7 97331747 to 97332769 1022 CpG island CpG island 19423
Tssr73573 7 97332017 to 97332095 78 - TSS region transcription start site region 73573
Tssr73574 7 97332103 to 97332114 11 - TSS region transcription start site region 73574
Tssr73575 7 97332116 to 97332142 26 - TSS region transcription start site region 73575
Tssr67964 7 97332311 to 97332331 20 + TSS region transcription start site region 67964
Kctd21 7 97332327 to 97350213 17886 + protein coding gene potassium channel tetramerisation domain containing 21
Tssr67965 7 97332638 to 97332651 13 + TSS region transcription start site region 67965
Cpgi19425 7 97371391 to 97371926 535 CpG island CpG island 19425
Tssr67966 7 97371592 to 97371601 9 + TSS region transcription start site region 67966
Alg8 7 97371594 to 97392159 20565 + protein coding gene asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase)
Tssr67967 7 97371604 to 97371640 36 + TSS region transcription start site region 67967
Cpgi19426 7 97399862 to 97400635 773 CpG island CpG island 19426
Ndufc2 7 97400003 to 97407800 7797 + protein coding gene NADH:ubiquinone oxidoreductase subunit C2
Tssr67968 7 97400044 to 97400047 3 + TSS region transcription start site region 67968
Tssr67969 7 97400049 to 97400115 66 + TSS region transcription start site region 67969
Tssr67970 7 97400125 to 97400136 11 + TSS region transcription start site region 67970
Tssr67971 7 97400168 to 97400178 10 + TSS region transcription start site region 67971
Gm16053 7 97406140 to 97406327 187 + pseudogene predicted gene 16053
Thrsp 7 97412933 to 97417550 4617 - protein coding gene thyroid hormone responsive
Tssr73576 7 97413417 to 97413435 18 - TSS region transcription start site region 73576
Tssr73577 7 97413596 to 97413601 5 - TSS region transcription start site region 73577
Cpgi19427 7 97417094 to 97417548 454 CpG island CpG island 19427
Tssr2334 7 97417461 to 97417469 8 - TSS region transcription start site region 2334
Tssr73578 7 97417511 to 97417539 28 - TSS region transcription start site region 73578
Gm32945 7 97418653 to 97420144 1491 + lncRNA gene predicted gene, 32945
Tssr73579 7 97420957 to 97420980 23 - TSS region transcription start site region 73579
Tssr67972 7 97451267 to 97451270 3 + TSS region transcription start site region 67972
Tssr67973 7 97451300 to 97451309 9 + TSS region transcription start site region 67973
Tssr67974 7 97451316 to 97451331 15 + TSS region transcription start site region 67974
Kctd14 7 97451323 to 97459557 8234 + protein coding gene potassium channel tetramerisation domain containing 14
Tssr67975 7 97451432 to 97451441 9 + TSS region transcription start site region 67975
Tssr67976 7 97453235 to 97453303 68 + TSS region transcription start site region 67976
Cpgi19428 7 97453342 to 97453588 246 CpG island CpG island 19428
7030407A21Rik 7 97455265 to 97456712 1447 unclassified gene RIKEN cDNA 7030407A21 gene
Cpgi19429 7 97457877 to 97458076 199 CpG island CpG island 19429
Tssr67977 7 97480906 to 97480917 11 + TSS region transcription start site region 67977
Tssr67978 7 97480920 to 97480927 7 + TSS region transcription start site region 67978
Tssr67979 7 97480928 to 97480966 38 + TSS region transcription start site region 67979
Cpgi19430 7 97480935 to 97481319 384 CpG island CpG island 19430
Ints4 7 97480956 to 97541395 60439 + protein coding gene integrator complex subunit 4
Tssr67980 7 97480994 to 97481078 84 + TSS region transcription start site region 67980
Tssr67981 7 97494067 to 97494072 5 + TSS region transcription start site region 67981
Gm24412 7 97521808 to 97521916 108 + snoRNA gene predicted gene, 24412
Tssr67982 7 97536214 to 97536227 13 + TSS region transcription start site region 67982
Tssr73580 7 97549777 to 97549790 13 - TSS region transcription start site region 73580
Aamdc 7 97550331 to 97579497 29166 - protein coding gene adipogenesis associated Mth938 domain containing
Tssr73581 7 97578764 to 97578767 3 - TSS region transcription start site region 73581
Cpgi19431 7 97579169 to 97580645 1476 CpG island CpG island 19431
Tssr73582 7 97579428 to 97579501 73 - TSS region transcription start site region 73582
Tssr67983 7 97579560 to 97579609 49 + TSS region transcription start site region 67983
Tssr67984 7 97579868 to 97579901 33 + TSS region transcription start site region 67984
Rsf1 7 97579889 to 97692778 112889 + protein coding gene remodeling and spacing factor 1
Cpgi19432 7 97580989 to 97581278 289 CpG island CpG island 19432
Tssr67985 7 97590214 to 97590218 4 + TSS region transcription start site region 67985
Ywhaq-ps1 7 97591693 to 97592402 709 - pseudogene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta, pseudogene 1
Rpl15-ps5 7 97594837 to 97595441 604 - pseudogene ribosomal protein L15, pseudogene 5
Rsf1os1 7 97598349 to 97645112 46763 - antisense lncRNA gene remodeling and spacing factor 1, opposite strand 1
Tssr67986 7 97637688 to 97637691 3 + TSS region transcription start site region 67986
Tssr73583 7 97645120 to 97645135 15 - TSS region transcription start site region 73583
C920008N22Rik 7 97649002 to 97652316 3314 unclassified gene RIKEN cDNA C920008N22 gene
Gm45186 7 97654276 to 97654753 477 - pseudogene predicted gene 45186
Rsf1os2 7 97681850 to 97696640 14790 - antisense lncRNA gene remodeling and spacing factor 1, opposite strand 2
Cpgi19433 7 97696063 to 97697336 1273 CpG island CpG island 19433
Tssr67987 7 97696645 to 97696725 80 + TSS region transcription start site region 67987
Clns1a 7 97696657 to 97720793 24136 + protein coding gene chloride channel, nucleotide-sensitive, 1A
Tssr73584 7 97721515 to 97721518 3 - TSS region transcription start site region 73584
Tssr67988 7 97724131 to 97724140 9 + TSS region transcription start site region 67988
Aqp11 7 97726379 to 97738247 11868 - protein coding gene aquaporin 11
Tssr73585 7 97729069 to 97729080 11 - TSS region transcription start site region 73585
Tssr73586 7 97729370 to 97729394 24 - TSS region transcription start site region 73586
Tssr73587 7 97730641 to 97730660 19 - TSS region transcription start site region 73587
Tssr67989 7 97735197 to 97735222 25 + TSS region transcription start site region 67989
Cpgi19434 7 97737521 to 97738594 1073 CpG island CpG island 19434
Tssr73588 7 97737611 to 97737631 20 - TSS region transcription start site region 73588
Tssr73589 7 97737977 to 97737984 7 - TSS region transcription start site region 73589
Tssr73590 7 97737994 to 97738056 62 - TSS region transcription start site region 73590
Tssr73591 7 97738222 to 97738317 95 - TSS region transcription start site region 73591
Cpgi19435 7 97748174 to 97748431 257 CpG island CpG island 19435
Tssr67990 7 97749797 to 97749806 9 + TSS region transcription start site region 67990
Gm39050 7 97759324 to 97801159 41835 - lncRNA gene predicted gene, 39050
Cpgi19436 7 97788108 to 97789439 1331 CpG island CpG island 19436
Tssr67991 7 97788348 to 97788390 42 + TSS region transcription start site region 67991
Tssr67992 7 97788489 to 97788582 93 + TSS region transcription start site region 67992
Tssr67993 7 97788592 to 97788616 24 + TSS region transcription start site region 67993
Tssr67994 7 97788785 to 97788834 49 + TSS region transcription start site region 67994
Tssr67995 7 97789508 to 97789516 8 + TSS region transcription start site region 67995
Tssr67996 7 97790793 to 97790800 7 + TSS region transcription start site region 67996
Tssr67997 7 97830919 to 97830930 11 + TSS region transcription start site region 67997
Pak1 7 97830931 to 97912381 81450 + protein coding gene p21 (RAC1) activated kinase 1
Tssr67998 7 97830943 to 97830967 24 + TSS region transcription start site region 67998
Tssr67999 7 97830979 to 97831005 26 + TSS region transcription start site region 67999
Tssr68000 7 97842905 to 97842912 7 + TSS region transcription start site region 68000
Tssr68001 7 97842917 to 97842980 63 + TSS region transcription start site region 68001
Cpgi19437 7 97842941 to 97843098 157 CpG island CpG island 19437
Tssr68002 7 97843007 to 97843016 9 + TSS region transcription start site region 68002
Tssr68003 7 97843039 to 97843059 20 + TSS region transcription start site region 68003
Tssr68004 7 97843088 to 97843108 20 + TSS region transcription start site region 68004
Tssr68005 7 97870755 to 97870756 1 + TSS region transcription start site region 68005
D7Dcr41 7 97902468 to 97902575 107 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 41
D7Mit321 7 97902474 to 97902584 110 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 321
Morq1 7 97902474 to 97902584 110 QTL modifier of Rs1 QTL 1
Cctq1 7 97902474 to 97902584 110 QTL central corneal thickness QTL 1
Tssr68006 7 97911106 to 97911132 26 + TSS region transcription start site region 68006
Gm44590 7 97918245 to 97918635 390 + pseudogene predicted gene 44590
Cpgi19438 7 97919899 to 97920056 157 CpG island CpG island 19438
Tssr68007 7 97919949 to 97919966 17 + TSS region transcription start site region 68007
Gdpd4 7 97919955 to 98049663 129708 + protein coding gene glycerophosphodiester phosphodiesterase domain containing 4
Tssr68008 7 97919971 to 97919991 20 + TSS region transcription start site region 68008
Gm19204 7 97984558 to 97985393 835 - pseudogene predicted gene, 19204
Myo7a 7 98051060 to 98119524 68464 - protein coding gene myosin VIIA
D7Smh12 7 98082901 to 98083125 224 DNA segment DNA segment, Chr 7, St. Mary's Hospital 12
Cpgi19439 7 98084582 to 98084749 167 CpG island CpG island 19439
Tssr73592 7 98085443 to 98085454 11 - TSS region transcription start site region 73592
Tssr73593 7 98085473 to 98085519 46 - TSS region transcription start site region 73593