Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:64370070-65310366

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fan1 7 64346758 to 64374095 27337 - protein coding gene FANCD2/FANCI-associated nuclease 1
Tssr72787 7 64373595 to 64373599 4 - TSS region transcription start site region 72787
Cpgi19201 7 64373824 to 64374243 419 CpG island CpG island 19201
Tssr72788 7 64374026 to 64374069 43 - TSS region transcription start site region 72788
Tssr72789 7 64374071 to 64374109 38 - TSS region transcription start site region 72789
Mphosph10 7 64376541 to 64392236 15695 - protein coding gene M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
Cpgi19202 7 64391940 to 64393049 1109 CpG island CpG island 19202
Tssr72790 7 64392196 to 64392205 9 - TSS region transcription start site region 72790
Tssr72791 7 64392214 to 64392259 45 - TSS region transcription start site region 72791
Mcee 7 64392612 to 64412121 19509 + protein coding gene methylmalonyl CoA epimerase
Tssr67012 7 64392720 to 64392731 11 + TSS region transcription start site region 67012
Tssr67013 7 64392736 to 64392763 27 + TSS region transcription start site region 67013
Tssr67014 7 64392766 to 64392790 24 + TSS region transcription start site region 67014
Tssr67015 7 64439603 to 64439604 1 + TSS region transcription start site region 67015
Cpgi19203 7 64501110 to 64502881 1771 CpG island CpG island 19203
Tssr67016 7 64501622 to 64501649 27 + TSS region transcription start site region 67016
Tssr67017 7 64501650 to 64501683 33 + TSS region transcription start site region 67017
Tssr67018 7 64501687 to 64501702 15 + TSS region transcription start site region 67018
Apba2 7 64501706 to 64753878 252172 + protein coding gene amyloid beta (A4) precursor protein-binding, family A, member 2
Tssr67019 7 64501727 to 64501738 11 + TSS region transcription start site region 67019
Tssr67020 7 64502039 to 64502048 9 + TSS region transcription start site region 67020
Tssr67021 7 64502061 to 64502072 11 + TSS region transcription start site region 67021
Tssr67022 7 64502076 to 64502085 9 + TSS region transcription start site region 67022
Tssr67023 7 64502090 to 64502155 65 + TSS region transcription start site region 67023
Tssr67024 7 64502157 to 64502176 19 + TSS region transcription start site region 67024
Tssr67025 7 64502190 to 64502205 15 + TSS region transcription start site region 67025
Tssr67026 7 64505360 to 64505364 4 + TSS region transcription start site region 67026
Tssr67027 7 64511784 to 64511791 7 + TSS region transcription start site region 67027
Gm45082 7 64515311 to 64515911 600 + unclassified gene predicted gene 45082
Gm44721 7 64529425 to 64529896 471 + unclassified gene predicted gene 44721
D7Mit298 7 64565835 to 64565941 106 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 298
Tssr67028 7 64753277 to 64753293 16 + TSS region transcription start site region 67028
Tssr67029 7 64754074 to 64754085 11 + TSS region transcription start site region 67029
Tssr67030 7 64754109 to 64754120 11 + TSS region transcription start site region 67030
Tssr67031 7 64754420 to 64754424 4 + TSS region transcription start site region 67031
Fam189a1 7 64756091 to 65156564 400473 - protein coding gene family with sequence similarity 189, member A1
D7Mit275 7 64821733 to 64821855 122 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 275
Cpgi19204 7 64840070 to 64840366 296 CpG island CpG island 19204
D7Jcs22 7 64840473 to 64840742 269 DNA segment DNA segment, Chr 7, John C. Schimenti 22
Nsmce3 7 64871650 to 64873040 1390 - protein coding gene NSE3 homolog, SMC5-SMC6 complex component
Cpgi19205 7 64872274 to 64873416 1142 CpG island CpG island 19205
Tssr72792 7 64872959 to 64872987 28 - TSS region transcription start site region 72792
Tssr72793 7 64872993 to 64873037 44 - TSS region transcription start site region 72793
D7Mit336 7 64886530 to 64886825 295 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology-336
Tssr72794 7 64907579 to 64907581 2 - TSS region transcription start site region 72794
Tssr72795 7 64925582 to 64925611 29 - TSS region transcription start site region 72795
D7Mit315 7 64952151 to 64952274 123 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 315
Gm25249 7 64956499 to 64956576 77 - miRNA gene predicted gene, 25249
Tssr2287 7 64971456 to 64971457 1 + TSS region transcription start site region 2287
Gm32963 7 65052100 to 65054964 2864 + lncRNA gene predicted gene, 32963
D7Mit313 7 65075129 to 65075277 148 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 313
Cpgi19206 7 65155555 to 65157015 1460 CpG island CpG island 19206
Tssr72796 7 65156505 to 65156561 56 - TSS region transcription start site region 72796
Gm17908 7 65170639 to 65171894 1255 + pseudogene predicted gene, 17908
Gm17918 7 65173618 to 65174191 573 - pseudogene predicted gene, 17918
1810049I09Rik 7 65212814 to 65213429 615 - lincRNA gene RIKEN cDNA 1810049I09 gene
Tssr72797 7 65213364 to 65213373 9 - TSS region transcription start site region 72797
Tssr72798 7 65213397 to 65213442 45 - TSS region transcription start site region 72798
Tssr72799 7 65213444 to 65213449 5 - TSS region transcription start site region 72799
Cpgi19207 7 65279316 to 65279544 228 CpG island CpG island 19207
Cpgi19208 7 65282850 to 65283129 279 CpG island CpG island 19208
Tjp1 7 65296165 to 65527781 231616 - protein coding gene tight junction protein 1