Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:62967965-63937967

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Chrna7 7 63098692 to 63212526 113834 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 7
Tssr2282 7 63127129 to 63127132 3 + TSS region transcription start site region 2282
Gm44741 7 63134164 to 63136290 2126 - unclassified gene predicted gene 44741
D7Mit176 7 63211190 to 63211340 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 176
Cpgi19185 7 63211803 to 63212942 1139 CpG island CpG island 19185
Tssr72763 7 63212514 to 63212531 17 - TSS region transcription start site region 72763
Tssr72764 7 63212542 to 63212570 28 - TSS region transcription start site region 72764
4930554H23Rik 7 63344692 to 63444529 99837 - lincRNA gene RIKEN cDNA 4930554H23 gene
Cpgi19186 7 63444213 to 63445474 1261 CpG island CpG island 19186
Tssr66981 7 63444741 to 63444762 21 + TSS region transcription start site region 66981
Otud7a 7 63444751 to 63759028 314277 + protein coding gene OTU domain containing 7A
Tssr66982 7 63444826 to 63444871 45 + TSS region transcription start site region 66982
Tssr66983 7 63452965 to 63452967 2 + TSS region transcription start site region 66983
Gm5898 7 63542479 to 63544549 2070 + pseudogene predicted gene 5898
Gm22228 7 63585922 to 63586022 100 + snRNA gene predicted gene, 22228
Gm3307 7 63606019 to 63606647 628 + pseudogene predicted gene 3307
D7Mit374 7 63686162 to 63686308 146 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology-374
Gm18804 7 63736979 to 63737489 510 - pseudogene predicted gene, 18804
Cpgi19187 7 63754750 to 63755515 765 CpG island CpG island 19187
Cpgi19188 7 63757248 to 63759496 2248 CpG island CpG island 19188
Gm44718 7 63765874 to 63766232 358 + lincRNA gene predicted gene 44718
Gm7482 7 63810826 to 63811330 504 - pseudogene predicted gene 7482
Gm39023 7 63823239 to 63852688 29449 - lncRNA gene predicted gene, 39023
Gm44720 7 63826978 to 63827237 259 + pseudogene predicted gene 44720
Cpgi19189 7 63858623 to 63858903 280 CpG island CpG island 19189
Cpgi19190 7 63866698 to 63866868 170 CpG island CpG island 19190
Gm32345 7 63873058 to 63876967 3909 - lncRNA gene predicted gene, 32345
Tssr2283 7 63875734 to 63875736 2 + TSS region transcription start site region 2283
Klf13 7 63886351 to 63938915 52564 - protein coding gene Kruppel-like factor 13
Tssr72765 7 63887645 to 63887649 4 - TSS region transcription start site region 72765
Tssr2284 7 63889100 to 63889116 16 - TSS region transcription start site region 2284
Tssr72766 7 63891424 to 63891529 105 - TSS region transcription start site region 72766
Cpgi19191 7 63891446 to 63891985 539 CpG island CpG island 19191
Tssr66984 7 63896379 to 63896392 13 + TSS region transcription start site region 66984
Tssr66985 7 63896477 to 63896499 22 + TSS region transcription start site region 66985
Tssr2285 7 63896502 to 63896514 12 + TSS region transcription start site region 2285
Gm27252 7 63896533 to 63899698 3165 + lncRNA gene predicted gene 27252
Cpgi19192 7 63896806 to 63897280 474 CpG island CpG island 19192
Tssr66986 7 63897396 to 63897425 29 + TSS region transcription start site region 66986
Gm45987 7 63901722 to 63909189 7467 - lncRNA gene predicted gene, 45987
Tssr66987 7 63905470 to 63905483 13 + TSS region transcription start site region 66987
Tssr72767 7 63908587 to 63908610 23 - TSS region transcription start site region 72767
E030018B13Rik 7 63916857 to 63920539 3682 + protein coding gene RIKEN cDNA E030018B13 gene
Tssr66988 7 63916880 to 63916916 36 + TSS region transcription start site region 66988
Tssr66989 7 63917241 to 63917248 7 + TSS region transcription start site region 66989
Tssr72768 7 63918971 to 63918978 7 - TSS region transcription start site region 72768
Tssr72769 7 63923414 to 63923418 4 - TSS region transcription start site region 72769
Tssr72770 7 63929350 to 63929354 4 - TSS region transcription start site region 72770
Cpgi19193 7 63936279 to 63936522 243 CpG island CpG island 19193
Tssr72771 7 63936309 to 63936342 33 - TSS region transcription start site region 72771
Tssr66990 7 63936626 to 63936636 10 + TSS region transcription start site region 66990
Tssr66991 7 63936685 to 63936695 10 + TSS region transcription start site region 66991
Cpgi19194 7 63936937 to 63939924 2987 CpG island CpG island 19194
Tssr72772 7 63937239 to 63937245 6 - TSS region transcription start site region 72772
Tssr72773 7 63937684 to 63937711 27 - TSS region transcription start site region 72773
Tssr66992 7 63937771 to 63937811 40 + TSS region transcription start site region 66992