Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:62123423-63478673

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(7Herc2-Mkrn3)1Taku 7 56050196 to 62420139 6369943 chromosomal duplication duplication, Chr 7, Toru Takumi 1
Del(7Herc2-Mkrn3)13FRdni 7 56050196 to 62420139 6369943 chromosomal deletion deletion, Chr 7, R D Nicholls13F
Gm9801 7 62193480 to 62279110 85630 - lincRNA gene predicted gene 9801
Tssr72745 7 62209483 to 62209494 11 - TSS region transcription start site region 72745
Tssr72746 7 62209499 to 62209546 47 - TSS region transcription start site region 72746
D7Mit276 7 62277634 to 62277744 110 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 276
Gm42395 7 62297387 to 62309919 12532 - lncRNA gene predicted gene, 42395
Tssr72747 7 62314608 to 62314612 4 - TSS region transcription start site region 72747
Gm32061 7 62337794 to 62423245 85451 - lincRNA gene predicted gene, 32061
Cpgi19179 7 62348169 to 62349239 1070 CpG island CpG island 19179
Ndn 7 62348277 to 62349928 1651 + protein coding gene necdin
Tssr66976 7 62348278 to 62348332 54 + TSS region transcription start site region 66976
Tssr66977 7 62348335 to 62348351 16 + TSS region transcription start site region 66977
Tssr66978 7 62349437 to 62349456 19 + TSS region transcription start site region 66978
Cpgi19180 7 62376942 to 62377463 521 CpG island CpG island 19180
Tssr66979 7 62376999 to 62377015 16 + TSS region transcription start site region 66979
Magel2 7 62377010 to 62381640 4630 + protein coding gene melanoma antigen, family L, 2
Cpgi19181 7 62377930 to 62378219 289 CpG island CpG island 19181
Cpgi19182 7 62406883 to 62407101 218 CpG island CpG island 19182
Tssr72748 7 62416173 to 62416193 20 - TSS region transcription start site region 72748
Tssr66980 7 62416477 to 62416487 10 + TSS region transcription start site region 66980
Mkrn3 7 62417593 to 62420139 2546 - protein coding gene makorin, ring finger protein, 3
Cpgi19183 7 62419030 to 62420289 1259 CpG island CpG island 19183
Tssr72749 7 62419433 to 62419455 22 - TSS region transcription start site region 72749
Tssr72750 7 62420142 to 62420157 15 - TSS region transcription start site region 72750
Tssr72751 7 62423246 to 62423255 9 - TSS region transcription start site region 72751
Tssr2281 7 62423268 to 62423292 24 - TSS region transcription start site region 2281
Tssr72752 7 62423309 to 62423319 10 - TSS region transcription start site region 72752
Tssr72753 7 62423397 to 62423406 9 - TSS region transcription start site region 72753
Tssr72754 7 62423419 to 62423426 7 - TSS region transcription start site region 72754
Peg12 7 62461871 to 62464510 2639 - protein coding gene paternally expressed 12
Tssr72755 7 62463272 to 62463276 4 - TSS region transcription start site region 72755
Cpgi19184 7 62463401 to 62464552 1151 CpG island CpG island 19184
Tssr72756 7 62464417 to 62464440 23 - TSS region transcription start site region 72756
Tssr72757 7 62464468 to 62464477 9 - TSS region transcription start site region 72757
Tssr72758 7 62464484 to 62464498 14 - TSS region transcription start site region 72758
Tssr72759 7 62464505 to 62464548 43 - TSS region transcription start site region 72759
Tssr72760 7 62464552 to 62464573 21 - TSS region transcription start site region 72760
Atp5l-ps1 7 62476306 to 62476617 311 + pseudogene ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, pseudogene 1
Vmn2r-ps61 7 62577320 to 62578198 878 - pseudogene vomeronasal 2, receptor, pseudogene 61
V125Dq5 7 62600000 to 62600000 0 QTL vitamin D active form serum level QTL 5
Gm22494 7 62611657 to 62611784 127 + snoRNA gene predicted gene, 22494
Gm46026 7 62658507 to 62662189 3682 + pseudogene predicted gene, 46026
Gm9445 7 62683402 to 62684686 1284 - pseudogene predicted gene 9445
Tbthq1 7 62700000 to 68100000 5400000 QTL trabecular bone thickness QTL 1
Gm5333 7 62751230 to 62752121 891 - pseudogene predicted gene 5333
A26c2 7 62778423 to 62823673 45250 - protein coding gene ANKRD26-like family C, member 2
Gm32111 7 62782245 to 62783090 845 + pseudogene predicted gene, 32111
Tssr72761 7 62823689 to 62823715 26 - TSS region transcription start site region 72761
Tssr72762 7 62823738 to 62823747 9 - TSS region transcription start site region 72762
Chrna7 7 63098692 to 63212526 113834 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 7
Tssr2282 7 63127129 to 63127132 3 + TSS region transcription start site region 2282
Gm44741 7 63134164 to 63136290 2126 - unclassified gene predicted gene 44741
D7Mit176 7 63211190 to 63211340 150 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 176
Cpgi19185 7 63211803 to 63212942 1139 CpG island CpG island 19185
Tssr72763 7 63212514 to 63212531 17 - TSS region transcription start site region 72763
Tssr72764 7 63212542 to 63212570 28 - TSS region transcription start site region 72764
4930554H23Rik 7 63344692 to 63444529 99837 - lincRNA gene RIKEN cDNA 4930554H23 gene
Cpgi19186 7 63444213 to 63445474 1261 CpG island CpG island 19186
Tssr66981 7 63444741 to 63444762 21 + TSS region transcription start site region 66981
Otud7a 7 63444751 to 63759028 314277 + protein coding gene OTU domain containing 7A
Tssr66982 7 63444826 to 63444871 45 + TSS region transcription start site region 66982
Tssr66983 7 63452965 to 63452967 2 + TSS region transcription start site region 66983