Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:56061462-57372783

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Herc2 7 56050196 to 56231800 181604 + protein coding gene HECT and RLD domain containing E3 ubiquitin protein ligase 2
Tssr66931 7 56107438 to 56107443 5 + TSS region transcription start site region 66931
Gm19187 7 56216362 to 56217249 887 - pseudogene predicted gene, 19187
Tssr66932 7 56239743 to 56239781 38 + TSS region transcription start site region 66932
Tsve1 7 56239760 to 87493512 31253752 QTL variable short tail (Tsv) enhancer 1
Oca2 7 56239760 to 56536518 296758 + protein coding gene oculocutaneous albinism II
Tssr66933 7 56239784 to 56239828 44 + TSS region transcription start site region 66933
Gm44506 7 56242186 to 56243150 964 - antisense lncRNA gene predicted gene 44506
D7Mit295 7 56311921 to 56312062 141 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 295
D10Jhu51 7 56414907 to 56415132 225 DNA segment DNA segment, Chr 10, Johns Hopkins University 51
Gm2995 7 56716462 to 56717783 1321 protein coding gene predicted gene 2995
Gabrg3 7 56716465 to 57387188 670723 - protein coding gene gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3
Cpgi19168 7 56716528 to 56716737 209 CpG island CpG island 19168
Gm44979 7 56748274 to 56749285 1011 + pseudogene predicted gene 44979
Gm17984 7 56804605 to 56805441 836 - pseudogene predicted gene, 17984
Gm44976 7 56838001 to 56838261 260 - pseudogene predicted gene 44976
Gm44977 7 56855432 to 56855851 419 - pseudogene predicted gene 44977
Gm17987 7 56879011 to 56879591 580 + pseudogene predicted gene, 17987
Tssr72658 7 56901447 to 56901448 1 - TSS region transcription start site region 72658
Gm18642 7 57026081 to 57027480 1399 + pseudogene predicted gene, 18642
Gm18308 7 57055183 to 57056450 1267 - pseudogene predicted gene, 18308
Tssr72659 7 57165177 to 57165182 5 - TSS region transcription start site region 72659
D7Mit159 7 57239039 to 57239186 147 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 159
Tssr72660 7 57240290 to 57240294 4 - TSS region transcription start site region 72660
Gm39017 7 57276321 to 57281650 5329 - lncRNA gene predicted gene, 39017
Tssr72661 7 57312766 to 57312793 27 - TSS region transcription start site region 72661
Tssr72662 7 57313092 to 57313096 4 - TSS region transcription start site region 72662