MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:56030196-56251800

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14 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34121	7	56038866 to 56049974	11108	-	lncRNA gene	predicted gene, 34121
Cpgi19167	7	56049788 to 56050716	928		CpG island	CpG island 19167
Tssr66929	7	56050135 to 56050217	82	+	TSS region	transcription start site region 66929
Dp(7Herc2-Mkrn3)1Taku	7	56050196 to 62420139	6369943		chromosomal duplication	duplication, Chr 7, Toru Takumi 1
Del(7Herc2-Mkrn3)13FRdni	7	56050196 to 62420139	6369943		chromosomal deletion	deletion, Chr 7, R D Nicholls13F
Herc2	7	56050196 to 56231800	181604	+	protein coding gene	HECT and RLD domain containing E3 ubiquitin protein ligase 2
Tssr66930	7	56050341 to 56050352	11	+	TSS region	transcription start site region 66930
Tssr66931	7	56107438 to 56107443	5	+	TSS region	transcription start site region 66931
Gm19187	7	56216362 to 56217249	887	-	pseudogene	predicted gene, 19187
Tssr66932	7	56239743 to 56239781	38	+	TSS region	transcription start site region 66932
Tsve1	7	56239760 to 87493512	31253752		QTL	variable short tail (Tsv) enhancer 1
Oca2	7	56239760 to 56536518	296758	+	protein coding gene	oculocutaneous albinism II
Tssr66933	7	56239784 to 56239828	44	+	TSS region	transcription start site region 66933
Gm44506	7	56242186 to 56243150	964	-	antisense lncRNA gene	predicted gene 44506