Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:4816161-4916198

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tammq5 7 4818048 to 4818048 0 QTL tibialis anterior muscle mass QTL 5
Edlmmq6 7 4818048 to 4818048 0 QTL extensor digitorum longus muscle mass QTL 6
Gmmq5 7 4818048 to 4818048 0 QTL gastrocnemius muscle mass QTL 5
Shisa7 7 4825552 to 4844696 19144 - protein coding gene shisa family member 7
Cpgi18255 7 4829926 to 4830270 344 CpG island CpG island 18255
Cpgi18256 7 4830632 to 4830901 269 CpG island CpG island 18256
Cpgi18257 7 4835812 to 4837055 1243 CpG island CpG island 18257
Gm36127 7 4841311 to 4844985 3674 + lncRNA gene predicted gene, 36127
Tssr70549 7 4843824 to 4843835 11 - TSS region transcription start site region 70549
Cpgi18258 7 4843834 to 4845044 1210 CpG island CpG island 18258
Tssr70550 7 4844665 to 4844699 34 - TSS region transcription start site region 70550
Tssr70551 7 4844710 to 4844725 15 - TSS region transcription start site region 70551
Tssr70552 7 4844794 to 4844869 75 - TSS region transcription start site region 70552
Isoc2b 7 4844959 to 4866179 21220 - protein coding gene isochorismatase domain containing 2b
Tssr70553 7 4844995 to 4845011 16 - TSS region transcription start site region 70553
Cpgi18259 7 4865938 to 4866615 677 CpG island CpG island 18259
Tssr70554 7 4866131 to 4866150 19 - TSS region transcription start site region 70554
Tssr70555 7 4866161 to 4866198 37 - TSS region transcription start site region 70555
Gm38939 7 4866187 to 4871785 5598 + lncRNA gene predicted gene, 38939
Tssr64368 7 4866356 to 4866410 54 + TSS region transcription start site region 64368
Cpgi18260 7 4876879 to 4877357 478 CpG island CpG island 18260
Tssr64369 7 4877047 to 4877111 64 + TSS region transcription start site region 64369
Isoc2a 7 4877053 to 4895717 18664 + protein coding gene isochorismatase domain containing 2a
Tssr64370 7 4877112 to 4877127 15 + TSS region transcription start site region 64370
Gm36210 7 4898450 to 4906516 8066 - protein coding gene predicted gene, 36210
Cpgi18261 7 4899264 to 4899418 154 CpG island CpG island 18261
Gm44983 7 4908886 to 4912357 3471 - lincRNA gene predicted gene 44983
Gm5320 7 4909038 to 4910556 1518 + pseudogene predicted gene 5320
Tssr70556 7 4912394 to 4912429 35 - TSS region transcription start site region 70556
Tssr64371 7 4912531 to 4912558 27 + TSS region transcription start site region 64371
Cpgi18262 7 4914944 to 4915596 652 CpG island CpG island 18262
Tssr64372 7 4915176 to 4915199 23 + TSS region transcription start site region 64372
Tssr64373 7 4915202 to 4915230 28 + TSS region transcription start site region 64373
Zfp628 7 4915217 to 4922002 6785 + protein coding gene zinc finger protein 628
Tssr64374 7 4915233 to 4915256 23 + TSS region transcription start site region 64374