Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:40918777-41408965

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vstm2b 7 40898342 to 40929972 31630 + protein coding gene V-set and transmembrane domain containing 2B
Gm29293 7 40969919 to 40974538 4619 + pseudogene predicted gene 29293
Tssr65965 7 40987549 to 40987570 21 + TSS region transcription start site region 65965
Tssr65966 7 40987576 to 40987590 14 + TSS region transcription start site region 65966
4930433I11Rik 7 40987609 to 40994833 7224 + protein coding gene RIKEN cDNA 4930433I11 gene
Gm45171 7 40989645 to 40990380 735 + pseudogene predicted gene 45171
Gm38997 7 41012039 to 41032619 20580 - lincRNA gene predicted gene, 38997
Gm4884 7 41032719 to 41045302 12583 + protein coding gene predicted gene 4884
Topbp1-ps2 7 41048659 to 41048847 188 - pseudogene topoisomerase (DNA) II binding protein 1, pseudogene 2
Gm45172 7 41057302 to 41058602 1300 - unclassified gene predicted gene 45172
1700110I07Rik 7 41060617 to 41089843 29226 - lincRNA gene RIKEN cDNA 1700110I07 gene
Gm28061 7 41067564 to 41068370 806 + pseudogene predicted gene 28061
Gm44839 7 41077625 to 41078025 400 - lincRNA gene predicted gene 44839
Gm9239 7 41095674 to 41099462 3788 + pseudogene predicted gene 9239
Gm6820 7 41121675 to 41125898 4223 + pseudogene predicted gene 6820
Gm44748 7 41128646 to 41284220 155574 - lincRNA gene predicted gene 44748
Gm2128 7 41155478 to 41159269 3791 + pseudogene predicted gene 2128
Gm28060 7 41163777 to 41163965 188 - pseudogene predicted gene 28060
Gm28667 7 41183751 to 41187090 3339 + pseudogene predicted gene 28667
Gm5896 7 41191107 to 41192058 951 + pseudogene predicted gene 5896
Gm34811 7 41209259 to 41209904 645 - lincRNA gene predicted gene, 34811
Gm6866 7 41210021 to 41219441 9420 + pseudogene predicted gene 6866
Gm45691 7 41234286 to 41235405 1119 + unclassified gene predicted gene 45691
Gm9244 7 41247021 to 41251605 4584 + pseudogene predicted gene 9244
Gm44520 7 41273595 to 41274396 801 - pseudogene predicted gene 44520
Gm5592 7 41284327 to 41290183 5856 + protein coding gene predicted gene 5592
Topbp1-ps1 7 41294129 to 41294312 183 - pseudogene topoisomerase (DNA) II binding protein 1, pseudogene 1
Gm2108 7 41304335 to 41307680 3345 + pseudogene predicted gene 2108
Tssr72112 7 41320501 to 41320521 20 - TSS region transcription start site region 72112
Gm17791 7 41325815 to 41327315 1500 - pseudogene predicted gene, 17791
Tssr65967 7 41335435 to 41335451 16 + TSS region transcription start site region 65967
Gm9246 7 41335441 to 41338819 3378 + pseudogene predicted gene 9246
AI987944 7 41372923 to 41393379 20456 - protein coding gene expressed sequence AI987944
Tssr72113 7 41393319 to 41393356 37 - TSS region transcription start site region 72113
Gm17102 7 41393698 to 41397447 3749 + lincRNA gene predicted gene 17102
Gm20449 7 41399378 to 41499417 100039 - protein coding gene predicted gene 20449
Vmn2r57 7 41399732 to 41448641 48909 - protein coding gene vomeronasal 2, receptor 57