Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:35825590-37335679

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
repro13 7 3463212 to 37142942 33679730 heritable phenotypic marker reproductive mutant 13, JAX Reproductive Mutagenesis Program
Asp3 7 27606373 to 37142942 9536569 QTL audiogenic seizure prone 3
E130304I02Rik 7 35802592 to 35838074 35482 + antisense lncRNA gene RIKEN cDNA E130304I02 gene
Cpgi18878 7 35836797 to 35837283 486 CpG island CpG island 18878
Gm28514 7 35838260 to 35839570 1310 + lincRNA gene predicted gene 28514
Tssr72061 7 35855264 to 35855275 11 - TSS region transcription start site region 72061
Gm36234 7 35919872 to 35923093 3221 - lncRNA gene predicted gene, 36234
Gm38990 7 35953648 to 35960933 7285 - lncRNA gene predicted gene, 38990
Tssr65913 7 35981152 to 35981153 1 + TSS region transcription start site region 65913
Gm36286 7 36043596 to 36052703 9107 + lncRNA gene predicted gene, 36286
Cpgi18879 7 36046974 to 36047210 236 CpG island CpG island 18879
D7Dcr7 7 36081899 to 36081998 99 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 7
Gm38991 7 36097378 to 36100518 3140 + lincRNA gene predicted gene, 38991
Rpl17-ps9 7 36118274 to 36118828 554 + pseudogene ribosomal protein L17, pseudogene 9
Gm36340 7 36153772 to 36158013 4241 + lncRNA gene predicted gene, 36340
Gm46016 7 36171304 to 36189215 17911 + lncRNA gene predicted gene, 46016
Tssr65914 7 36171314 to 36171329 15 + TSS region transcription start site region 65914
Cpgi18880 7 36174916 to 36175202 286 CpG island CpG island 18880
Tssr65915 7 36234216 to 36234225 9 + TSS region transcription start site region 65915
Gm9211 7 36234292 to 36235266 974 + pseudogene predicted gene 9211
D7Mit54 7 36284587 to 36284815 228 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 54
Gm23292 7 36302515 to 36302615 100 + miRNA gene predicted gene, 23292
D7Mit309 7 36425154 to 36425322 168 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 309
Spmo1 7 36425154 to 36425322 168 QTL sperm mobility 1
D7Dcr8 7 36425160 to 36425330 170 DNA segment DNA Segment, Chr 7, Derry C. Roopenian 8
Gm25247 7 36430611 to 36430700 89 + miRNA gene predicted gene, 25247
Gm38992 7 36538521 to 36543017 4496 - lncRNA gene predicted gene, 38992
Gm29129 7 36568743 to 36573095 4352 + lincRNA gene predicted gene 29129
Rigs1 7 36580590 to 92745138 56164548 QTL radiation induced gastroschisis 1
D7Mit227 7 36580590 to 36580679 89 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 227
Eae12 7 36580590 to 36580679 89 QTL experimental allergic encephalomyelitis susceptibility 12
jrc 7 36580679 to 4627246 -31953433 heritable phenotypic marker juvenile recessive cataract
Gm36420 7 36597142 to 36603864 6722 - lncRNA gene predicted gene, 36420
Gm38993 7 36626487 to 36649175 22688 - lncRNA gene predicted gene, 38993
Gm36722 7 36652543 to 36697277 44734 - lncRNA gene predicted gene, 36722
Cpgi18881 7 36660419 to 36660706 287 CpG island CpG island 18881
Cpgi18882 7 36679995 to 36680166 171 CpG island CpG island 18882
Tssr72062 7 36687767 to 36687771 4 - TSS region transcription start site region 72062
Cpgi18883 7 36694298 to 36694518 220 CpG island CpG island 18883
Cpgi18884 7 36695177 to 36698886 3709 CpG island CpG island 18884
Gm38285 7 36695438 to 36696359 921 + unclassified gene predicted gene, 38285
Tssr72063 7 36696070 to 36696074 4 - TSS region transcription start site region 72063
Tssr65916 7 36696626 to 36696678 52 + TSS region transcription start site region 65916
Tssr65917 7 36698002 to 36698059 57 + TSS region transcription start site region 65917
Tshz3 7 36698118 to 36773553 75435 + protein coding gene teashirt zinc finger family member 3
Tssr65918 7 36698212 to 36698244 32 + TSS region transcription start site region 65918
Tssr65919 7 36700636 to 36700642 6 + TSS region transcription start site region 65919
Gm37452 7 36710174 to 36711333 1159 + unclassified gene predicted gene, 37452
Tssr65920 7 36711897 to 36711902 5 + TSS region transcription start site region 65920
Gm38340 7 36721846 to 36725853 4007 + unclassified gene predicted gene, 38340
E230020A03Rik 7 36727177 to 36729562 2385 + unclassified gene RIKEN cDNA E230020A03 gene
Tssr2204 7 36729442 to 36729447 5 + TSS region transcription start site region 2204
Tssr65921 7 36729487 to 36729498 11 + TSS region transcription start site region 65921
Gm37827 7 36733017 to 36734558 1541 + unclassified gene predicted gene, 37827
Tssr65922 7 36739857 to 36739859 2 + TSS region transcription start site region 65922
Gm24550 7 36751195 to 36751473 278 - unclassified non-coding RNA gene predicted gene, 24550
Cpgi18885 7 36770380 to 36771370 990 CpG island CpG island 18885
Tssr65923 7 36773143 to 36773151 8 + TSS region transcription start site region 65923
Tssr2205 7 36832766 to 36832770 4 + TSS region transcription start site region 2205
D7Ertd312e 7 36850889 to 36851102 213 DNA segment DNA segment, Chr 7, ERATO Doi 312, expressed
Gm36656 7 36914162 to 36917400 3238 + lncRNA gene predicted gene, 36656
Gm36567 7 36918995 to 36922188 3193 - lncRNA gene predicted gene, 36567
Gm36464 7 36936106 to 36961464 25358 + lncRNA gene predicted gene, 36464
Gm36830 7 37092800 to 37112821 20021 + lncRNA gene predicted gene, 36830
Gm28078 7 37119993 to 37128692 8699 - lincRNA gene predicted gene 28078
Gm28076 7 37137011 to 37140382 3371 - lincRNA gene predicted gene 28076
Gm28075 7 37140541 to 37141711 1170 + lincRNA gene predicted gene 28075
Bhr6 7 37142825 to 37142942 117 QTL bronchial hyperresponsiveness 6
D7Mit247 7 37142825 to 37142942 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 247
Gm38994 7 37172083 to 37173446 1363 - lncRNA gene predicted gene, 38994
Gm29919 7 37203138 to 37204454 1316 - lncRNA gene predicted gene, 29919
Gm38995 7 37205758 to 37208602 2844 + lncRNA gene predicted gene, 38995
Tssr65924 7 37215664 to 37215665 1 + TSS region transcription start site region 65924
Tssr72064 7 37231068 to 37231080 12 - TSS region transcription start site region 72064
Tssr65925 7 37272508 to 37272513 5 + TSS region transcription start site region 65925
Gm38439 7 37293175 to 37300411 7236 + lncRNA gene predicted gene, 38439
Gm28077 7 37300564 to 37305176 4612 + lincRNA gene predicted gene 28077
Gm45768 7 37317899 to 37321100 3201 - lincRNA gene predicted gene 45768
Tssr72065 7 37320041 to 37320046 5 - TSS region transcription start site region 72065
Gm30544 7 37320972 to 37327894 6922 + lncRNA gene predicted gene, 30544
Tssr65926 7 37320980 to 37321013 33 + TSS region transcription start site region 65926
Gm30483 7 37327979 to 37329923 1944 + lncRNA gene predicted gene, 30483
Bbaa16 7 116817642 to 36580590 -80237052 QTL B.burgdorferi-associated arthritis 16