Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:30816668-31037147

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84 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ffar2 7 30818348 to 30823775 5427 - protein coding gene free fatty acid receptor 2
Cpgi18823 7 30819407 to 30819982 575 CpG island CpG island 18823
Tssr71857 7 30820242 to 30820257 15 - TSS region transcription start site region 71857
Gm32236 7 30820296 to 30828594 8298 + lncRNA gene predicted gene, 32236
Tssr71858 7 30821092 to 30821099 7 - TSS region transcription start site region 71858
Tssr71859 7 30821142 to 30821156 14 - TSS region transcription start site region 71859
Tssr71860 7 30821205 to 30821214 9 - TSS region transcription start site region 71860
Tssr71861 7 30823766 to 30823774 8 - TSS region transcription start site region 71861
Tssr71862 7 30823821 to 30823834 13 - TSS region transcription start site region 71862
Tssr65816 7 30831202 to 30831203 1 + TSS region transcription start site region 65816
Tssr65817 7 30832484 to 30832526 42 + TSS region transcription start site region 65817
Tssr65818 7 30832798 to 30832841 43 + TSS region transcription start site region 65818
Tssr71863 7 30836596 to 30836626 30 - TSS region transcription start site region 71863
Ffar3 7 30854330 to 30856178 1848 - protein coding gene free fatty acid receptor 3
Cpgi18824 7 30855111 to 30855309 198 CpG island CpG island 18824
Tssr71864 7 30856187 to 30856200 13 - TSS region transcription start site region 71864
Ffar1 7 30860568 to 30861470 902 - protein coding gene free fatty acid receptor 1
Cpgi18825 7 30861100 to 30861388 288 CpG island CpG island 18825
Cd22 7 30865404 to 30880342 14938 - protein coding gene CD22 antigen
Gm29439 7 30872733 to 30873333 600 + antisense lncRNA gene predicted gene 29439
Cpgi18826 7 30873320 to 30873644 324 CpG island CpG island 18826
Tssr71865 7 30878092 to 30878131 39 - TSS region transcription start site region 71865
Tssr71866 7 30880263 to 30880290 27 - TSS region transcription start site region 71866
D7Ertd128e 7 30885031 to 30886446 1415 + lincRNA gene DNA segment, Chr 7, ERATO Doi 128, expressed
Mag 7 30899176 to 30914873 15697 - protein coding gene myelin-associated glycoprotein
Cpgi18827 7 30908860 to 30909161 301 CpG island CpG island 18827
Tssr71867 7 30909186 to 30909239 53 - TSS region transcription start site region 71867
Tssr71868 7 30914832 to 30914878 46 - TSS region transcription start site region 71868
Tssr71869 7 30915016 to 30915049 33 - TSS region transcription start site region 71869
Gm44662 7 30916983 to 30946824 29841 + lincRNA gene predicted gene 44662
Hamp2 7 30922372 to 30924181 1809 - protein coding gene hepcidin antimicrobial peptide 2
Tssr71870 7 30924169 to 30924185 16 - TSS region transcription start site region 71870
Usf2-ps1 7 30926668 to 30927147 479 - pseudogene upstream transcription factor 2, pseudogene 1
Hamp 7 30942368 to 30944017 1649 - protein coding gene hepcidin antimicrobial peptide
Tssr71871 7 30944019 to 30944035 16 - TSS region transcription start site region 71871
Usf2 7 30945248 to 30956803 11555 - protein coding gene upstream transcription factor 2
Tssr71872 7 30946175 to 30946189 14 - TSS region transcription start site region 71872
Cpgi18828 7 30955702 to 30957967 2265 CpG island CpG island 18828
Gm17077 7 30955825 to 30958004 2179 + antisense lncRNA gene predicted gene 17077
Tssr71873 7 30956605 to 30956624 19 - TSS region transcription start site region 71873
Tssr71874 7 30956721 to 30956737 16 - TSS region transcription start site region 71874
Tssr71875 7 30956742 to 30956781 39 - TSS region transcription start site region 71875
Tssr71876 7 30956827 to 30956911 84 - TSS region transcription start site region 71876
Gm4673 7 30956909 to 30961619 4710 + antisense lncRNA gene predicted gene 4673
Tssr65819 7 30956927 to 30956963 36 + TSS region transcription start site region 65819
Tssr71877 7 30957060 to 30957089 29 - TSS region transcription start site region 71877
Tssr65820 7 30957134 to 30957137 3 + TSS region transcription start site region 65820
Tssr71878 7 30957220 to 30957267 47 - TSS region transcription start site region 71878
Tssr65821 7 30957298 to 30957300 2 + TSS region transcription start site region 65821
Tssr71879 7 30957342 to 30957375 33 - TSS region transcription start site region 71879
Lsr 7 30957770 to 30973464 15694 - protein coding gene lipolysis stimulated lipoprotein receptor
Cpgi18829 7 30958002 to 30958367 365 CpG island CpG island 18829
Tssr71880 7 30966354 to 30966371 17 - TSS region transcription start site region 71880
Tssr71881 7 30971917 to 30971928 11 - TSS region transcription start site region 71881
Tssr71882 7 30972169 to 30972197 28 - TSS region transcription start site region 71882
Cpgi18830 7 30972834 to 30974201 1367 CpG island CpG island 18830
Tssr71883 7 30973177 to 30973205 28 - TSS region transcription start site region 71883
Tssr71884 7 30973367 to 30973380 13 - TSS region transcription start site region 71884
Tssr71885 7 30973399 to 30973435 36 - TSS region transcription start site region 71885
Tssr71886 7 30973440 to 30973453 13 - TSS region transcription start site region 71886
Tssr71887 7 30973468 to 30973480 12 - TSS region transcription start site region 71887
Tssr71888 7 30973629 to 30973647 18 - TSS region transcription start site region 71888
Tssr65822 7 30973786 to 30973816 30 + TSS region transcription start site region 65822
Fam187b 7 30973804 to 30989726 15922 + protein coding gene family with sequence similarity 187, member B
Tssr65823 7 30973831 to 30973849 18 + TSS region transcription start site region 65823
Tssr71889 7 30973894 to 30973915 21 - TSS region transcription start site region 71889
Tssr2189 7 30977040 to 30977045 5 + TSS region transcription start site region 2189
Tssr65824 7 30977048 to 30977071 23 + TSS region transcription start site region 65824
Tssr65825 7 30977085 to 30977091 6 + TSS region transcription start site region 65825
Tssr65826 7 30981862 to 30981873 11 + TSS region transcription start site region 65826
Tssr2190 7 30981888 to 30981893 5 + TSS region transcription start site region 2190
Tssr65827 7 30981898 to 30981924 26 + TSS region transcription start site region 65827
Gm18196 7 30985489 to 30986340 851 - pseudogene predicted gene, 18196
Gm42377 7 30989791 to 31029001 39210 - lncRNA gene predicted gene, 42377
Tssr71890 7 31002797 to 31002807 10 - TSS region transcription start site region 71890
Tssr65828 7 31002924 to 31002942 18 + TSS region transcription start site region 65828
Fxyd5 7 31032723 to 31042331 9608 - protein coding gene FXYD domain-containing ion transport regulator 5
Tssr65829 7 31032853 to 31032923 70 + TSS region transcription start site region 65829
Tssr65830 7 31035228 to 31035268 40 + TSS region transcription start site region 65830
Tssr2191 7 31035460 to 31035485 25 - TSS region transcription start site region 2191
Tssr71891 7 31036457 to 31036499 42 - TSS region transcription start site region 71891
Gm38984 7 31036523 to 31057714 21191 + lncRNA gene predicted gene, 38984
Tssr65831 7 31036988 to 31037008 20 + TSS region transcription start site region 65831
Tssr71892 7 31037018 to 31037094 76 - TSS region transcription start site region 71892