Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29572219-29852032

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930432E11Rik 7 29556615 to 29576779 20164 + pseudogene RIKEN cDNA 4930432E11 gene
A330087D11Rik 7 29568903 to 29573928 5025 - lincRNA gene RIKEN cDNA A330087D11 gene
Gm45978 7 29619477 to 29622580 3103 + protein coding gene predicted gene, 45978
n-R5s153 7 29657161 to 29657276 115 - rRNA gene nuclear encoded rRNA 5S 153
Catsperg2 7 29697219 to 29727032 29813 - protein coding gene cation channel sperm associated auxiliary subunit gamma 2
Tssr71675 7 29726966 to 29726985 19 - TSS region transcription start site region 71675
Tssr71676 7 29726991 to 29727007 16 - TSS region transcription start site region 71676
Gm23103 7 29737318 to 29737424 106 - snRNA gene predicted gene, 23103
Gm38983 7 29763788 to 29768417 4629 - lncRNA gene predicted gene, 38983
Gm44954 7 29764437 to 29764663 226 - pseudogene predicted gene 44954
Cpgi18762 7 29768462 to 29768989 527 CpG island CpG island 18762
Tssr65637 7 29768534 to 29768543 9 + TSS region transcription start site region 65637
Tssr65638 7 29768546 to 29768559 13 + TSS region transcription start site region 65638
Zfp84 7 29768552 to 29779821 11269 + protein coding gene zinc finger protein 84
Tssr65639 7 29768568 to 29768642 74 + TSS region transcription start site region 65639
Tssr65640 7 29768643 to 29768650 7 + TSS region transcription start site region 65640
Mir1964 7 29773294 to 29773376 82 + miRNA gene microRNA 1964
Eosn3 7 29781452 to 29781452 0 QTL eosinophil differential 3
Eosn1 7 29781452 to 29781452 0 QTL eosinophil differential 1
Cpgi18763 7 29783775 to 29784564 789 CpG island CpG island 18763
Tssr65641 7 29783958 to 29784028 70 + TSS region transcription start site region 65641
Zfp30 7 29783998 to 29794702 10704 + protein coding gene zinc finger protein 30
Cpgi18764 7 29792722 to 29793636 914 CpG island CpG island 18764
Gm6579 7 29798712 to 29799796 1084 - pseudogene predicted gene 6579
Tssr71677 7 29799871 to 29799879 8 - TSS region transcription start site region 71677
Cpgi18765 7 29815834 to 29816418 584 CpG island CpG island 18765
Tssr65642 7 29816061 to 29816153 92 + TSS region transcription start site region 65642
Zfp790 7 29816114 to 29831005 14891 + protein coding gene zinc finger protein 790
Zfp940 7 29843936 to 29853753 9817 - protein coding gene zinc finger protein 940