Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:29075142-29175160

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ryr1 7 29003344 to 29125179 121835 - protein coding gene ryanodine receptor 1, skeletal muscle
Gm26604 7 29071658 to 29079911 8253 + antisense lncRNA gene predicted gene, 26604
Mir1963 7 29083636 to 29083694 58 - miRNA gene microRNA 1963
Cpgi18737 7 29085694 to 29086378 684 CpG island CpG island 18737
Cpgi18738 7 29087135 to 29087441 306 CpG island CpG island 18738
Cpgi18739 7 29109171 to 29109791 620 CpG island CpG island 18739
Tssr71608 7 29113888 to 29113920 32 - TSS region transcription start site region 71608
Tssr71609 7 29125142 to 29125160 18 - TSS region transcription start site region 71609
Tssr65595 7 29134887 to 29134898 11 + TSS region transcription start site region 65595
Rasgrp4 7 29134913 to 29153961 19048 + protein coding gene RAS guanyl releasing protein 4
Tssr65596 7 29134925 to 29134957 32 + TSS region transcription start site region 65596
Tssr65597 7 29134971 to 29134992 21 + TSS region transcription start site region 65597
Tssr65598 7 29137629 to 29137642 13 + TSS region transcription start site region 65598
Gm16282 7 29138440 to 29140312 1872 - antisense lncRNA gene predicted gene 16282
Fam98c 7 29152510 to 29156234 3724 - protein coding gene family with sequence similarity 98, member C
Cpgi18740 7 29155299 to 29156615 1316 CpG island CpG island 18740
Tssr71610 7 29155597 to 29155616 19 - TSS region transcription start site region 71610
Tssr71611 7 29155622 to 29155631 9 - TSS region transcription start site region 71611
Tssr65599 7 29155643 to 29155668 25 + TSS region transcription start site region 65599
Tssr65600 7 29155671 to 29155691 20 + TSS region transcription start site region 65600
1110035H17Rik 7 29155680 to 29156920 1240 + antisense lncRNA gene RIKEN cDNA 1110035H17 gene
Tssr71612 7 29155717 to 29155730 13 - TSS region transcription start site region 71612
Tssr65601 7 29155744 to 29155754 10 + TSS region transcription start site region 65601
Tssr71613 7 29155936 to 29155956 20 - TSS region transcription start site region 71613
Tssr71614 7 29155963 to 29155995 32 - TSS region transcription start site region 71614
Tssr71615 7 29156172 to 29156210 38 - TSS region transcription start site region 71615
Spred3 7 29158829 to 29170411 11582 - protein coding gene sprouty-related EVH1 domain containing 3
Cpgi18741 7 29161531 to 29162068 537 CpG island CpG island 18741
Tssr71616 7 29166901 to 29166905 4 - TSS region transcription start site region 71616
Cpgi18742 7 29167696 to 29167958 262 CpG island CpG island 18742
Tssr65602 7 29168393 to 29168402 9 + TSS region transcription start site region 65602
Cpgi18743 7 29169327 to 29169577 250 CpG island CpG island 18743
Tssr65603 7 29170204 to 29170224 20 + TSS region transcription start site region 65603
Ggn 7 29170210 to 29173938 3728 + protein coding gene gametogenetin
Cpgi18744 7 29170223 to 29170623 400 CpG island CpG island 18744
Tssr65604 7 29170240 to 29170249 9 + TSS region transcription start site region 65604
Tssr65605 7 29170320 to 29170327 7 + TSS region transcription start site region 65605
Tssr65606 7 29170345 to 29170414 69 + TSS region transcription start site region 65606
Tssr65607 7 29170851 to 29170860 9 + TSS region transcription start site region 65607
Cpgi18745 7 29171001 to 29173092 2091 CpG island CpG island 18745
Tssr65608 7 29171404 to 29171427 23 + TSS region transcription start site region 65608
Tssr65609 7 29172339 to 29172346 7 + TSS region transcription start site region 65609
Psmd8 7 29174187 to 29180673 6486 - protein coding gene proteasome (prosome, macropain) 26S subunit, non-ATPase, 8