Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:28397899-28537902

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Paf1 7 28392996 to 28399383 6387 + protein coding gene Paf1, RNA polymerase II complex component
Samd4b 7 28399522 to 28436191 36669 - protein coding gene sterile alpha motif domain containing 4B
Tssr71533 7 28401101 to 28401146 45 - TSS region transcription start site region 71533
Cpgi18703 7 28435620 to 28437206 1586 CpG island CpG island 18703
Tssr65473 7 28436089 to 28436098 9 + TSS region transcription start site region 65473
Tssr65474 7 28436124 to 28436133 9 + TSS region transcription start site region 65474
Tssr71534 7 28436234 to 28436245 11 - TSS region transcription start site region 71534
Tssr71535 7 28436274 to 28436340 66 - TSS region transcription start site region 71535
Tssr65475 7 28436363 to 28436370 7 + TSS region transcription start site region 65475
1700085B13Rik 7 28436391 to 28436953 562 unclassified gene RIKEN cDNA 1700085B13 gene
Tssr65476 7 28436394 to 28436401 7 + TSS region transcription start site region 65476
Gmfg 7 28437447 to 28448211 10764 + protein coding gene glia maturation factor, gamma
Tssr65477 7 28437447 to 28437486 39 + TSS region transcription start site region 65477
Tssr65478 7 28440931 to 28440945 14 + TSS region transcription start site region 65478
Tssr65479 7 28440946 to 28441018 72 + TSS region transcription start site region 65479
Tssr65480 7 28441026 to 28441035 9 + TSS region transcription start site region 65480
Tssr2167 7 28441141 to 28441156 15 + TSS region transcription start site region 2167
Tssr2168 7 28442739 to 28442745 6 - TSS region transcription start site region 2168
Tssr2169 7 28442870 to 28442908 38 - TSS region transcription start site region 2169
Tssr65481 7 28443077 to 28443124 47 + TSS region transcription start site region 65481
Tssr65482 7 28443953 to 28443962 9 + TSS region transcription start site region 65482
Tssr65483 7 28444780 to 28444850 70 + TSS region transcription start site region 65483
Tssr65484 7 28444939 to 28444969 30 + TSS region transcription start site region 65484
Cpgi18704 7 28451421 to 28452835 1414 CpG island CpG island 18704
Tssr65485 7 28451943 to 28451989 46 + TSS region transcription start site region 65485
Lrfn1 7 28451985 to 28468242 16257 + protein coding gene leucine rich repeat and fibronectin type III domain containing 1
Cpgi18705 7 28458665 to 28459997 1332 CpG island CpG island 18705
Cpgi18706 7 28466563 to 28467957 1394 CpG island CpG island 18706
Tssr65486 7 28467899 to 28467902 3 + TSS region transcription start site region 65486
Gm6518 7 28477327 to 28477852 525 - pseudogene predicted gene 6518
Cpgi18707 7 28490783 to 28491123 340 CpG island CpG island 18707
1700028B04Rik 7 28496941 to 28497492 551 + pseudogene RIKEN cDNA 1700028B04 gene
Cpgi18708 7 28497090 to 28497359 269 CpG island CpG island 18708
Ifnl2 7 28508836 to 28510455 1619 - protein coding gene interferon lambda 2
Ifnl3 7 28522836 to 28524322 1486 + protein coding gene interferon lambda 3
Tssr71536 7 28528078 to 28528087 9 - TSS region transcription start site region 71536
Gm19880 7 28534772 to 28535089 317 + pseudogene predicted gene, 19880