Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:27228433-27312144

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Itpkc 7 27207170 to 27228597 21427 - protein coding gene inositol 1,4,5-trisphosphate 3-kinase C
Cpgi18629 7 27227976 to 27228943 967 CpG island CpG island 18629
Tssr71374 7 27228502 to 27228517 15 - TSS region transcription start site region 71374
Tssr71375 7 27228605 to 27228636 31 - TSS region transcription start site region 71375
Cpgi18630 7 27232819 to 27233282 463 CpG island CpG island 18630
Tssr71376 7 27232872 to 27232888 16 - TSS region transcription start site region 71376
Tssr65255 7 27233003 to 27233064 61 + TSS region transcription start site region 65255
Coq8b 7 27233023 to 27257950 24927 + protein coding gene coenzyme Q8B
Tssr65256 7 27243366 to 27243369 3 + TSS region transcription start site region 65256
Gm15567 7 27249263 to 27257932 8669 - antisense lncRNA gene predicted gene 15567
Tssr65257 7 27252175 to 27252208 33 + TSS region transcription start site region 65257
Gm44641 7 27252176 to 27262252 10076 + unclassified non-coding RNA gene predicted gene 44641
Tssr65258 7 27252256 to 27252266 10 + TSS region transcription start site region 65258
Tssr65259 7 27256479 to 27256504 25 + TSS region transcription start site region 65259
Cpgi18631 7 27257136 to 27257608 472 CpG island CpG island 18631
Cpgi18632 7 27258330 to 27259373 1043 CpG island CpG island 18632
Numbl 7 27258433 to 27282144 23711 + protein coding gene numb-like
Tssr65260 7 27258761 to 27258815 54 + TSS region transcription start site region 65260
Tssr65261 7 27258840 to 27258859 19 + TSS region transcription start site region 65261
Tssr65262 7 27266748 to 27266767 19 + TSS region transcription start site region 65262
Gm15570 7 27271764 to 27272383 619 - pseudogene predicted gene 15570
9530041E20Rik 7 27282183 to 27283130 947 unclassified gene RIKEN cDNA 9530041E20 gene
Cpgi18633 7 27284995 to 27285471 476 CpG island CpG island 18633
D7Mit294 7 27289442 to 27289559 117 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 294
Nhdlq6 7 27289442 to 27289559 117 QTL non-HDL QTL 6
Ltbp4 7 27305136 to 27337692 32556 - protein coding gene latent transforming growth factor beta binding protein 4
Cpgi18634 7 27305403 to 27305569 166 CpG island CpG island 18634
Cpgi18635 7 27308905 to 27309064 159 CpG island CpG island 18635
Tssr65263 7 27308914 to 27308951 37 + TSS region transcription start site region 65263
Tssr65264 7 27309278 to 27309294 16 + TSS region transcription start site region 65264
Tssr71377 7 27310228 to 27310249 21 - TSS region transcription start site region 71377
Tssr71378 7 27310439 to 27310453 14 - TSS region transcription start site region 71378
Cpgi18636 7 27310449 to 27310718 269 CpG island CpG island 18636
Tssr71379 7 27310613 to 27310640 27 - TSS region transcription start site region 71379
Tssr71380 7 27310643 to 27310693 50 - TSS region transcription start site region 71380
Tssr71381 7 27310695 to 27310706 11 - TSS region transcription start site region 71381
Tssr71382 7 27311193 to 27311204 11 - TSS region transcription start site region 71382
Tssr71383 7 27311221 to 27311235 14 - TSS region transcription start site region 71383
Tssr65265 7 27311437 to 27311450 13 + TSS region transcription start site region 65265