Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25700140-26029883

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87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skts14 7 25687002 to 25705077 18075 QTL skin tumor susceptibility 14
Tgfb1 7 25687002 to 25705077 18075 + protein coding gene transforming growth factor, beta 1
Tssr65165 7 25704170 to 25704223 53 + TSS region transcription start site region 65165
Cpgi18614 7 25704714 to 25705193 479 CpG island CpG island 18614
Tssr65166 7 25704777 to 25704802 25 + TSS region transcription start site region 65166
Tssr65167 7 25704809 to 25704833 24 + TSS region transcription start site region 65167
Ccdc97 7 25711106 to 25719088 7982 - protein coding gene coiled-coil domain containing 97
Tssr71288 7 25712133 to 25712147 14 - TSS region transcription start site region 71288
Tssr71289 7 25712558 to 25712569 11 - TSS region transcription start site region 71289
Tssr71290 7 25718684 to 25718723 39 - TSS region transcription start site region 71290
Tssr71291 7 25718801 to 25718815 14 - TSS region transcription start site region 71291
Cpgi18615 7 25718848 to 25719253 405 CpG island CpG island 18615
Tssr71292 7 25718976 to 25719062 86 - TSS region transcription start site region 71292
Tssr65168 7 25719178 to 25719181 3 + TSS region transcription start site region 65168
Hnrnpul1 7 25721165 to 25754757 33592 - protein coding gene heterogeneous nuclear ribonucleoprotein U-like 1
Tssr71293 7 25721718 to 25721728 10 - TSS region transcription start site region 71293
Tssr71294 7 25722856 to 25722878 22 - TSS region transcription start site region 71294
Tssr65169 7 25722885 to 25722897 12 + TSS region transcription start site region 65169
Tssr71295 7 25722925 to 25722956 31 - TSS region transcription start site region 71295
Tssr71296 7 25724733 to 25724835 102 - TSS region transcription start site region 71296
Tssr71297 7 25726014 to 25726049 35 - TSS region transcription start site region 71297
Tssr71298 7 25733092 to 25733112 20 - TSS region transcription start site region 71298
Tssr71299 7 25736955 to 25736960 5 - TSS region transcription start site region 71299
Tssr71300 7 25745230 to 25745242 12 - TSS region transcription start site region 71300
Tssr71301 7 25748423 to 25748458 35 - TSS region transcription start site region 71301
D7Mit307 7 25752242 to 25752347 105 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 307
Cpgi18616 7 25753949 to 25755333 1384 CpG island CpG island 18616
Tssr71302 7 25754566 to 25754577 11 - TSS region transcription start site region 71302
Tssr71303 7 25754629 to 25754640 11 - TSS region transcription start site region 71303
Tssr71304 7 25754681 to 25754692 11 - TSS region transcription start site region 71304
Tssr71305 7 25754706 to 25754750 44 - TSS region transcription start site region 71305
Tssr71306 7 25754752 to 25754771 19 - TSS region transcription start site region 71306
Tssr71307 7 25754801 to 25754810 9 - TSS region transcription start site region 71307
Tssr65170 7 25754895 to 25754933 38 + TSS region transcription start site region 65170
Tssr71308 7 25754952 to 25754963 11 - TSS region transcription start site region 71308
Tssr71309 7 25755110 to 25755160 50 - TSS region transcription start site region 71309
Tssr71310 7 25755203 to 25755214 11 - TSS region transcription start site region 71310
Tssr71311 7 25755256 to 25755276 20 - TSS region transcription start site region 71311
Tssr65171 7 25755471 to 25755474 3 + TSS region transcription start site region 65171
Cpgi18617 7 25755671 to 25756245 574 CpG island CpG island 18617
Tssr71312 7 25756078 to 25756097 19 - TSS region transcription start site region 71312
Tssr71313 7 25756121 to 25756138 17 - TSS region transcription start site region 71313
Tssr71314 7 25756178 to 25756198 20 - TSS region transcription start site region 71314
Axl 7 25757273 to 25788705 31432 - protein coding gene AXL receptor tyrosine kinase
Tssr71315 7 25772162 to 25772186 24 - TSS region transcription start site region 71315
Tssr71316 7 25772190 to 25772223 33 - TSS region transcription start site region 71316
Tssr71317 7 25772226 to 25772320 94 - TSS region transcription start site region 71317
Cpgi18618 7 25781450 to 25781906 456 CpG island CpG island 18618
Tssr71318 7 25786993 to 25787006 13 - TSS region transcription start site region 71318
Tssr71319 7 25787049 to 25787062 13 - TSS region transcription start site region 71319
Tssr71320 7 25787406 to 25787418 12 - TSS region transcription start site region 71320
Tssr71321 7 25788493 to 25788513 20 - TSS region transcription start site region 71321
Tssr71322 7 25788514 to 25788525 11 - TSS region transcription start site region 71322
Tssr71323 7 25788533 to 25788554 21 - TSS region transcription start site region 71323
Tssr71324 7 25788635 to 25788710 75 - TSS region transcription start site region 71324
Gm29763 7 25792228 to 25792843 615 - pseudogene predicted gene, 29763
Tssr2150 7 25801231 to 25801233 2 + TSS region transcription start site region 2150
Tssr71325 7 25801921 to 25801925 4 - TSS region transcription start site region 71325
Del(7Cyp2s1-Cyp2a5)1Ding 7 25802476 to 26843264 1040788 chromosomal deletion deletion, Chr 7, Xinxin Ding 1
Cyp2s1 7 25802476 to 25816530 14054 - protein coding gene cytochrome P450, family 2, subfamily s, polypeptide 1
Tssr71326 7 25803431 to 25803450 19 - TSS region transcription start site region 71326
Tssr71327 7 25803613 to 25803629 16 - TSS region transcription start site region 71327
Cpgi18619 7 25805765 to 25806089 324 CpG island CpG island 18619
Gm45226 7 25810175 to 25810462 287 + pseudogene predicted gene 45226
Cpgi18620 7 25816267 to 25816932 665 CpG island CpG island 18620
Tssr71328 7 25816500 to 25816535 35 - TSS region transcription start site region 71328
Tssr71329 7 25816548 to 25816563 15 - TSS region transcription start site region 71329
Tssr71330 7 25816565 to 25816568 3 - TSS region transcription start site region 71330
Tssr71331 7 25816616 to 25816628 12 - TSS region transcription start site region 71331
Gm26707 7 25816654 to 25820654 4000 + lincRNA gene predicted gene, 26707
Tssr71332 7 25816680 to 25816723 43 - TSS region transcription start site region 71332
Gm4613 7 25828602 to 25828877 275 - pseudogene predicted gene 4613
Gm24865 7 25828632 to 25828727 95 - miRNA gene predicted gene, 24865
Gm46015 7 25837950 to 25839958 2008 + lncRNA gene predicted gene, 46015
Gm30146 7 25860140 to 25869883 9743 + lincRNA gene predicted gene, 30146
Gm23921 7 25868945 to 25869051 106 + unclassified non-coding RNA gene predicted gene, 23921
Gm45228 7 25875325 to 25875676 351 + pseudogene predicted gene 45228
Gm6434 7 25882018 to 25882389 371 - pseudogene predicted gene 6434
Tssr65172 7 25897651 to 25897672 21 + TSS region transcription start site region 65172
Cyp2b10 7 25897658 to 25926624 28966 + protein coding gene cytochrome P450, family 2, subfamily b, polypeptide 10
Tssr65173 7 25899575 to 25899582 7 + TSS region transcription start site region 65173
Tssr65174 7 25913937 to 25913946 9 + TSS region transcription start site region 65174
Cyp2b28-ps 7 25950226 to 25988455 38229 + pseudogene cytochrome P450, family 2, subfamily b, polypeptide 28, pseudogene
Gm45227 7 25950253 to 25950421 168 + pseudogene predicted gene 45227
Gm45225 7 25981502 to 25988460 6958 + pseudogene predicted gene 45225
Cyp2b27-ps 7 26004608 to 26028897 24289 - pseudogene cytochrome P450, family 2, subfamily b, polypeptide 27, pseudogene
BC026762 7 26009889 to 26012391 2502 + lincRNA gene cDNA sequence BC026762