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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:25288187-25438348

Filter by:
87 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cic 7 25267704 to 25294159 26455 + protein coding gene capicua transcriptional repressor
Tssr65108 7 25289377 to 25289389 12 + TSS region transcription start site region 65108
Tssr65109 7 25289492 to 25289510 18 + TSS region transcription start site region 65109
Tssr65110 7 25291083 to 25291098 15 + TSS region transcription start site region 65110
Tssr65111 7 25291194 to 25291209 15 + TSS region transcription start site region 65111
Pafah1b3 7 25295048 to 25297973 2925 - protein coding gene platelet-activating factor acetylhydrolase, isoform 1b, subunit 3
Cpgi18592 7 25296903 to 25298104 1201 CpG island CpG island 18592
Tssr71216 7 25297478 to 25297532 54 - TSS region transcription start site region 71216
Tssr71217 7 25297548 to 25297571 23 - TSS region transcription start site region 71217
Tssr71218 7 25297582 to 25297633 51 - TSS region transcription start site region 71218
Tssr71219 7 25297636 to 25297653 17 - TSS region transcription start site region 71219
Tssr71220 7 25297675 to 25297723 48 - TSS region transcription start site region 71220
Tssr71221 7 25297732 to 25297752 20 - TSS region transcription start site region 71221
Tssr71222 7 25297866 to 25297958 92 - TSS region transcription start site region 71222
Tssr71223 7 25297967 to 25298005 38 - TSS region transcription start site region 71223
Cpgi18593 7 25301204 to 25301491 287 CpG island CpG island 18593
Tssr65112 7 25301343 to 25301362 19 + TSS region transcription start site region 65112
Tssr65113 7 25301366 to 25301380 14 + TSS region transcription start site region 65113
Prr19 7 25301411 to 25304132 2721 + protein coding gene proline rich 19
Tssr65114 7 25301416 to 25301421 5 + TSS region transcription start site region 65114
Tssr2140 7 25301468 to 25301471 3 + TSS region transcription start site region 2140
Tssr65115 7 25301476 to 25301524 48 + TSS region transcription start site region 65115
Tssr65116 7 25301528 to 25301540 12 + TSS region transcription start site region 65116
Cpgi18594 7 25305864 to 25306641 777 CpG island CpG island 18594
Tssr2141 7 25305935 to 25305960 25 + TSS region transcription start site region 2141
Tssr65117 7 25306085 to 25306157 72 + TSS region transcription start site region 65117
Tmem145 7 25306106 to 25316195 10089 + protein coding gene transmembrane protein 145
Tssr65118 7 25306220 to 25306233 13 + TSS region transcription start site region 65118
Cpgi18595 7 25314607 to 25316092 1485 CpG island CpG island 18595
Cpgi18596 7 25316671 to 25317893 1222 CpG island CpG island 18596
Tssr65119 7 25316757 to 25316903 146 + TSS region transcription start site region 65119
Tssr65120 7 25316917 to 25316968 51 + TSS region transcription start site region 65120
Tssr65121 7 25316973 to 25316992 19 + TSS region transcription start site region 65121
Tssr65122 7 25317067 to 25317131 64 + TSS region transcription start site region 65122
Megf8 7 25317164 to 25365917 48753 + protein coding gene multiple EGF-like-domains 8
Cpgi18597 7 25363187 to 25363348 161 CpG island CpG island 18597
Cnfn 7 25367620 to 25369724 2104 - protein coding gene cornifelin
Tssr71224 7 25367650 to 25367670 20 - TSS region transcription start site region 71224
Tssr71225 7 25367675 to 25367684 9 - TSS region transcription start site region 71225
Tssr71226 7 25367692 to 25367703 11 - TSS region transcription start site region 71226
Cpgi18598 7 25367806 to 25368555 749 CpG island CpG island 18598
Tssr71227 7 25368081 to 25368096 15 - TSS region transcription start site region 71227
Tssr71228 7 25369048 to 25369115 67 - TSS region transcription start site region 71228
Tssr71229 7 25369712 to 25369730 18 - TSS region transcription start site region 71229
Cpgi18599 7 25376697 to 25376863 166 CpG island CpG island 18599
4732471J01Rik 7 25376819 to 25566417 189598 + antisense lncRNA gene RIKEN cDNA 4732471J01 gene
Lipe 7 25379527 to 25398486 18959 - protein coding gene lipase, hormone sensitive
Cpgi18600 7 25379743 to 25380237 494 CpG island CpG island 18600
Tssr71230 7 25384951 to 25384958 7 - TSS region transcription start site region 71230
Tssr71231 7 25384961 to 25384972 11 - TSS region transcription start site region 71231
Tssr71232 7 25388399 to 25388424 25 - TSS region transcription start site region 71232
Gm38968 7 25388635 to 25389558 923 + lncRNA gene predicted gene, 38968
Tssr71233 7 25388971 to 25388984 13 - TSS region transcription start site region 71233
Tssr71234 7 25388986 to 25389002 16 - TSS region transcription start site region 71234
Tssr71235 7 25389012 to 25389030 18 - TSS region transcription start site region 71235
Tssr71236 7 25390098 to 25390124 26 - TSS region transcription start site region 71236
Tssr2142 7 25390125 to 25390128 3 - TSS region transcription start site region 2142
Tssr71237 7 25390128 to 25390131 3 - TSS region transcription start site region 71237
Tssr65123 7 25392270 to 25392279 9 + TSS region transcription start site region 65123
Tssr65124 7 25394287 to 25394307 20 + TSS region transcription start site region 65124
Cpgi18601 7 25395253 to 25395805 552 CpG island CpG island 18601
Tssr71238 7 25395533 to 25395538 5 - TSS region transcription start site region 71238
Tssr71239 7 25395579 to 25395587 8 - TSS region transcription start site region 71239
Tssr71240 7 25395610 to 25395695 85 - TSS region transcription start site region 71240
Cpgi18602 7 25395983 to 25396467 484 CpG island CpG island 18602
Tssr65125 7 25396177 to 25396193 16 + TSS region transcription start site region 65125
Tssr65126 7 25396446 to 25396485 39 + TSS region transcription start site region 65126
Cpgi18603 7 25396742 to 25396915 173 CpG island CpG island 18603
Tssr71241 7 25398697 to 25398719 22 - TSS region transcription start site region 71241
Cxcl17 7 25400053 to 25412886 12833 - protein coding gene chemokine (C-X-C motif) ligand 17
Tssr71242 7 25400261 to 25400298 37 - TSS region transcription start site region 71242
Tssr2143 7 25412797 to 25412802 5 - TSS region transcription start site region 2143
Tssr71243 7 25412807 to 25412816 9 - TSS region transcription start site region 71243
Tssr71244 7 25412832 to 25412841 9 - TSS region transcription start site region 71244
Tssr71245 7 25412845 to 25412856 11 - TSS region transcription start site region 71245
Tssr71246 7 25412857 to 25412885 28 - TSS region transcription start site region 71246
Tssr71247 7 25412902 to 25412913 11 - TSS region transcription start site region 71247
Tssr2144 7 25412947 to 25412950 3 - TSS region transcription start site region 2144
Tssr2145 7 25412965 to 25412974 9 - TSS region transcription start site region 2145
Tssr2146 7 25412983 to 25412987 4 - TSS region transcription start site region 2146
Tssr2147 7 25413026 to 25413032 6 - TSS region transcription start site region 2147
Gm5587 7 25419153 to 25419826 673 - pseudogene predicted gene 5587
Gm20949 7 25421841 to 25422792 951 - pseudogene predicted gene, 20949
Cpgi18604 7 25422719 to 25423150 431 CpG island CpG island 18604
Tssr2148 7 25427409 to 25427420 11 + TSS region transcription start site region 2148
Tssr65127 7 25431729 to 25431734 5 + TSS region transcription start site region 65127
Tssr65128 7 25433677 to 25433688 11 + TSS region transcription start site region 65128