Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16626954-16816959

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm29443 7 16613824 to 16632643 18819 + antisense lncRNA gene predicted gene 29443
Gm29725 7 16647383 to 16647789 406 - pseudogene predicted gene, 29725
Ceacam-ps1 7 16649030 to 16657478 8448 - pseudogene carcinoembryonic antigen-related cell adhesion molecule pseudogene 1
Tssr70765 7 16657496 to 16657500 4 - TSS region transcription start site region 70765
Ceacam15 7 16671331 to 16675705 4374 - protein coding gene carcinoembryonic antigen-related cell adhesion molecule 15
Tssr70766 7 16675617 to 16675623 6 - TSS region transcription start site region 70766
Gm8209 7 16693817 to 16694369 552 - pseudogene predicted gene 8209
Tssr64616 7 16700818 to 16700826 8 + TSS region transcription start site region 64616
Tssr64617 7 16714851 to 16714855 4 + TSS region transcription start site region 64617
Gm5586 7 16719116 to 16719910 794 - pseudogene predicted gene 5586
Tssr70767 7 16719925 to 16719940 15 - TSS region transcription start site region 70767
Ceacam9 7 16721929 to 16726110 4181 + protein coding gene carcinoembryonic antigen-related cell adhesion molecule 9
Tssr64618 7 16721954 to 16721959 5 + TSS region transcription start site region 64618
Cpgi18385 7 16723689 to 16723849 160 CpG island CpG island 18385
Tssr64619 7 16733665 to 16733679 14 + TSS region transcription start site region 64619
Tssr64620 7 16734406 to 16734408 2 + TSS region transcription start site region 64620
Cpgi18386 7 16738270 to 16738757 487 CpG island CpG island 18386
Ap2s1 7 16738410 to 16749294 10884 + protein coding gene adaptor-related protein complex 2, sigma 1 subunit
Tssr64621 7 16738436 to 16738476 40 + TSS region transcription start site region 64621
Tssr64622 7 16749092 to 16749104 12 + TSS region transcription start site region 64622
Cpgi18387 7 16771924 to 16772169 245 CpG island CpG island 18387
Cpgi18388 7 16781012 to 16782647 1635 CpG island CpG island 18388
Tssr64623 7 16781341 to 16781352 11 + TSS region transcription start site region 64623
Slc1a5 7 16781345 to 16798274 16929 + protein coding gene solute carrier family 1 (neutral amino acid transporter), member 5
Tssr64624 7 16781359 to 16781376 17 + TSS region transcription start site region 64624
Tssr64625 7 16782303 to 16782391 88 + TSS region transcription start site region 64625
9530015I06Rik 7 16789016 to 16789324 308 unclassified gene RIKEN cDNA 9530015I06 gene
Tssr64626 7 16792525 to 16792550 25 + TSS region transcription start site region 64626
Tssr64627 7 16793530 to 16793541 11 + TSS region transcription start site region 64627
Cpgi18389 7 16795710 to 16796090 380 CpG island CpG island 18389
Fkrp 7 16809246 to 16816732 7486 - protein coding gene fukutin related protein
Cpgi18390 7 16810452 to 16811991 1539 CpG island CpG island 18390
Tssr70768 7 16815472 to 16815481 9 - TSS region transcription start site region 70768
Cpgi18391 7 16815811 to 16817220 1409 CpG island CpG island 18391
Strn4 7 16815889 to 16840931 25042 + protein coding gene striatin, calmodulin binding protein 4
Tssr64628 7 16816273 to 16816286 13 + TSS region transcription start site region 64628
Tssr64629 7 16816299 to 16816361 62 + TSS region transcription start site region 64629
Tssr70769 7 16816731 to 16816744 13 - TSS region transcription start site region 70769