Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16148900-16309151

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc8a2 7 16129826 to 16161063 31237 + protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 2
Cpgi18359 7 16158668 to 16159310 642 CpG island CpG island 18359
Tssr64587 7 16160184 to 16160194 10 + TSS region transcription start site region 64587
Tssr64588 7 16160195 to 16160210 15 + TSS region transcription start site region 64588
Cpgi18360 7 16175011 to 16175831 820 CpG island CpG island 18360
Tssr64589 7 16175085 to 16175104 19 + TSS region transcription start site region 64589
Meis3 7 16175096 to 16186510 11414 + protein coding gene Meis homeobox 3
Tssr64590 7 16175342 to 16175356 14 + TSS region transcription start site region 64590
Tssr64591 7 16175358 to 16175438 80 + TSS region transcription start site region 64591
Tssr64592 7 16175453 to 16175460 7 + TSS region transcription start site region 64592
Dhx34 7 16197220 to 16222079 24859 - protein coding gene DEAH (Asp-Glu-Ala-His) box polypeptide 34
Tssr70704 7 16204126 to 16204133 7 - TSS region transcription start site region 70704
Tssr70705 7 16204154 to 16204213 59 - TSS region transcription start site region 70705
Tssr2080 7 16204247 to 16204252 5 - TSS region transcription start site region 2080
Cpgi18361 7 16212849 to 16213036 187 CpG island CpG island 18361
Tssr70706 7 16213184 to 16213205 21 - TSS region transcription start site region 70706
Cpgi18362 7 16217998 to 16218438 440 CpG island CpG island 18362
Cpgi18363 7 16221882 to 16222265 383 CpG island CpG island 18363
Tssr70707 7 16222013 to 16222050 37 - TSS region transcription start site region 70707
Gm45409 7 16228900 to 16229151 251 + pseudogene predicted gene 45409
C5ar2 7 16234585 to 16244154 9569 - protein coding gene complement component 5a receptor 2
Gm26473 7 16234738 to 16234864 126 - snRNA gene predicted gene, 26473
Tssr70708 7 16235399 to 16235403 4 - TSS region transcription start site region 70708
Cpgi18364 7 16237158 to 16237408 250 CpG island CpG island 18364
Tssr70709 7 16239776 to 16239794 18 - TSS region transcription start site region 70709
Tssr70710 7 16239884 to 16239925 41 - TSS region transcription start site region 70710
Tssr70711 7 16240393 to 16240422 29 - TSS region transcription start site region 70711
Tssr70712 7 16244152 to 16244196 44 - TSS region transcription start site region 70712
D7Msu2 7 16244418 to 16244610 192 DNA segment DNA segment, Chr 7, Michigan State University 2
C5ar1 7 16246743 to 16259540 12797 - protein coding gene complement component 5a receptor 1
Tssr70713 7 16247475 to 16247479 4 - TSS region transcription start site region 70713
Tssr70714 7 16247772 to 16247787 15 - TSS region transcription start site region 70714
Cpgi18365 7 16248070 to 16248970 900 CpG island CpG island 18365
Tssr64593 7 16248413 to 16248462 49 + TSS region transcription start site region 64593
Tssr70715 7 16248505 to 16248516 11 - TSS region transcription start site region 70715
Tssr70716 7 16257525 to 16257528 3 - TSS region transcription start site region 70716
Tssr70717 7 16257860 to 16257894 34 - TSS region transcription start site region 70717
Tssr2081 7 16258042 to 16258066 24 + TSS region transcription start site region 2081
Tssr70718 7 16259185 to 16259201 16 - TSS region transcription start site region 70718
Cpgi18366 7 16271989 to 16274450 2461 CpG island CpG island 18366
Inafm1 7 16272013 to 16273617 1604 - protein coding gene InaF motif containing 1
Tssr70719 7 16273260 to 16273331 71 - TSS region transcription start site region 70719
Tssr70720 7 16273912 to 16273926 14 - TSS region transcription start site region 70720
Tssr70721 7 16273927 to 16273960 33 - TSS region transcription start site region 70721
Ccdc9 7 16274042 to 16286795 12753 - protein coding gene coiled-coil domain containing 9
Tssr70722 7 16285426 to 16285440 14 - TSS region transcription start site region 70722
Tssr70723 7 16285454 to 16285479 25 - TSS region transcription start site region 70723
Tssr70724 7 16285992 to 16286005 13 - TSS region transcription start site region 70724
Tssr70725 7 16286010 to 16286034 24 - TSS region transcription start site region 70725
Cpgi18367 7 16286171 to 16286909 738 CpG island CpG island 18367
Tssr70726 7 16286744 to 16286788 44 - TSS region transcription start site region 70726
Tssr70727 7 16286795 to 16286810 15 - TSS region transcription start site region 70727
Cpgi18368 7 16294862 to 16295976 1114 CpG island CpG island 18368
Tssr64594 7 16295119 to 16295153 34 + TSS region transcription start site region 64594
Tssr70728 7 16295438 to 16295452 14 - TSS region transcription start site region 70728
Tssr70729 7 16295459 to 16295486 27 - TSS region transcription start site region 70729
Tssr64595 7 16295838 to 16295857 19 + TSS region transcription start site region 64595
Cpgi18369 7 16296874 to 16297202 328 CpG island CpG island 18369
Cpgi18370 7 16299535 to 16300252 717 CpG island CpG island 18370
Tssr64596 7 16299887 to 16299904 17 + TSS region transcription start site region 64596
Tssr64597 7 16308330 to 16308361 31 + TSS region transcription start site region 64597
Bbc3 7 16308393 to 16318205 9812 + protein coding gene BCL2 binding component 3
Tssr64598 7 16308745 to 16308761 16 + TSS region transcription start site region 64598
Cpgi18371 7 16308750 to 16310995 2245 CpG island CpG island 18371