Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:16096589-16196870

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi18352 7 16098098 to 16099117 1019 CpG island CpG island 18352
Napa 7 16098458 to 16117975 19517 + protein coding gene N-ethylmaleimide sensitive fusion protein attachment protein alpha
Tssr64576 7 16098574 to 16098585 11 + TSS region transcription start site region 64576
Tssr64577 7 16098595 to 16098672 77 + TSS region transcription start site region 64577
Tssr64578 7 16116719 to 16116740 21 + TSS region transcription start site region 64578
Cpgi18353 7 16119836 to 16120305 469 CpG island CpG island 18353
Tssr64579 7 16119868 to 16119907 39 + TSS region transcription start site region 64579
Kptn 7 16119895 to 16127516 7621 + protein coding gene kaptin
Cpgi18354 7 16129514 to 16129710 196 CpG island CpG island 18354
Tssr64580 7 16129756 to 16129845 89 + TSS region transcription start site region 64580
Slc8a2 7 16129826 to 16161063 31237 + protein coding gene solute carrier family 8 (sodium/calcium exchanger), member 2
Tssr64581 7 16130145 to 16130170 25 + TSS region transcription start site region 64581
Tssr64582 7 16130178 to 16130189 11 + TSS region transcription start site region 64582
Tssr64583 7 16130252 to 16130269 17 + TSS region transcription start site region 64583
Cpgi18355 7 16130257 to 16130816 559 CpG island CpG island 18355
Tssr64584 7 16130271 to 16130283 12 + TSS region transcription start site region 64584
Tssr64585 7 16130285 to 16130333 48 + TSS region transcription start site region 64585
Tssr64586 7 16130340 to 16130366 26 + TSS region transcription start site region 64586
Cpgi18356 7 16140430 to 16141211 781 CpG island CpG island 18356
Cpgi18357 7 16144769 to 16145603 834 CpG island CpG island 18357
C030044M21Rik 7 16146161 to 16147386 1225 unclassified gene RIKEN cDNA C030044M21 gene
Cpgi18358 7 16146589 to 16146870 281 CpG island CpG island 18358
Cpgi18359 7 16158668 to 16159310 642 CpG island CpG island 18359
Tssr64587 7 16160184 to 16160194 10 + TSS region transcription start site region 64587
Tssr64588 7 16160195 to 16160210 15 + TSS region transcription start site region 64588
Cpgi18360 7 16175011 to 16175831 820 CpG island CpG island 18360
Tssr64589 7 16175085 to 16175104 19 + TSS region transcription start site region 64589
Meis3 7 16175096 to 16186510 11414 + protein coding gene Meis homeobox 3
Tssr64590 7 16175342 to 16175356 14 + TSS region transcription start site region 64590
Tssr64591 7 16175358 to 16175438 80 + TSS region transcription start site region 64591
Tssr64592 7 16175453 to 16175460 7 + TSS region transcription start site region 64592