Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:130545070-130915074

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsmce4a 7 130532523 to 130547412 14889 - protein coding gene NSE4 homolog A, SMC5-SMC6 complex component
Cpgi19806 7 130546472 to 130547677 1205 CpG island CpG island 19806
Tssr69471 7 130546963 to 130546980 17 + TSS region transcription start site region 69471
Tssr69472 7 130546981 to 130547014 33 + TSS region transcription start site region 69472
Tssr75157 7 130547256 to 130547270 14 - TSS region transcription start site region 75157
Tssr75158 7 130547273 to 130547350 77 - TSS region transcription start site region 75158
Tssr75159 7 130547358 to 130547386 28 - TSS region transcription start site region 75159
Tssr75160 7 130547389 to 130547410 21 - TSS region transcription start site region 75160
Tssr69473 7 130552907 to 130552918 11 + TSS region transcription start site region 69473
Tssr69474 7 130552932 to 130552946 14 + TSS region transcription start site region 69474
Tssr69475 7 130552971 to 130552985 14 + TSS region transcription start site region 69475
Tssr69476 7 130552992 to 130553009 17 + TSS region transcription start site region 69476
Tssr69477 7 130553013 to 130553028 15 + TSS region transcription start site region 69477
Tssr69478 7 130553030 to 130553062 32 + TSS region transcription start site region 69478
Tssr69479 7 130569902 to 130569906 4 + TSS region transcription start site region 69479
Tssr75161 7 130573130 to 130573137 7 - TSS region transcription start site region 75161
Tssr69480 7 130574885 to 130574896 11 + TSS region transcription start site region 69480
Tssr69481 7 130574920 to 130574942 22 + TSS region transcription start site region 69481
Tssr69482 7 130574955 to 130574973 18 + TSS region transcription start site region 69482
Tssr69483 7 130575039 to 130575052 13 + TSS region transcription start site region 69483
Tssr69484 7 130576858 to 130576871 13 + TSS region transcription start site region 69484
Tssr69485 7 130577334 to 130577351 17 + TSS region transcription start site region 69485
Tacc2 7 130577438 to 130764785 187347 + protein coding gene transforming, acidic coiled-coil containing protein 2
Tssr69486 7 130601382 to 130601418 36 + TSS region transcription start site region 69486
Gm34365 7 130601946 to 130619491 17545 - lncRNA gene predicted gene, 34365
Tssr69487 7 130624555 to 130624573 18 + TSS region transcription start site region 69487
Tssr69488 7 130624582 to 130624601 19 + TSS region transcription start site region 69488
Tssr69489 7 130624614 to 130624622 8 + TSS region transcription start site region 69489
Tssr69490 7 130624625 to 130624640 15 + TSS region transcription start site region 69490
Tssr75162 7 130624888 to 130624901 13 - TSS region transcription start site region 75162
Tssr69491 7 130627834 to 130627837 3 + TSS region transcription start site region 69491
Gm39098 7 130644562 to 130645932 1370 - lncRNA gene predicted gene, 39098
Tssr69492 7 130645454 to 130645476 22 + TSS region transcription start site region 69492
Tssr69493 7 130645492 to 130645503 11 + TSS region transcription start site region 69493
Tssr69494 7 130645673 to 130645692 19 + TSS region transcription start site region 69494
Tssr69495 7 130645700 to 130645714 14 + TSS region transcription start site region 69495
Cpgi19807 7 130645809 to 130646977 1168 CpG island CpG island 19807
Tssr69496 7 130645877 to 130645957 80 + TSS region transcription start site region 69496
Tssr69497 7 130646105 to 130646110 5 + TSS region transcription start site region 69497
Tssr69498 7 130646183 to 130646248 65 + TSS region transcription start site region 69498
Tssr69499 7 130646266 to 130646277 11 + TSS region transcription start site region 69499
Tssr69500 7 130646298 to 130646317 19 + TSS region transcription start site region 69500
Tssr75163 7 130646887 to 130646892 5 - TSS region transcription start site region 75163
4930513N20Rik 7 130653128 to 130654392 1264 - unclassified gene RIKEN cDNA 4930513N20 gene
Tssr69501 7 130663002 to 130663010 8 + TSS region transcription start site region 69501
D7Mit187 7 130663596 to 130663741 145 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 187
D7Mit186 7 130663611 to 130663760 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 186
Tssr69502 7 130674631 to 130674658 27 + TSS region transcription start site region 69502
Cpgi19808 7 130692464 to 130693112 648 CpG island CpG island 19808
Tssr69503 7 130692507 to 130692526 19 + TSS region transcription start site region 69503
Tssr69504 7 130692532 to 130692575 43 + TSS region transcription start site region 69504
Tssr69505 7 130692586 to 130692626 40 + TSS region transcription start site region 69505
Tssr69506 7 130692673 to 130692742 69 + TSS region transcription start site region 69506
Tssr69507 7 130692747 to 130692788 41 + TSS region transcription start site region 69507
Tssr69508 7 130692889 to 130692898 9 + TSS region transcription start site region 69508
Gm34283 7 130702501 to 130728516 26015 - lncRNA gene predicted gene, 34283
Tssr69509 7 130716760 to 130716782 22 + TSS region transcription start site region 69509
Tssr75164 7 130720762 to 130720808 46 - TSS region transcription start site region 75164
Tssr69510 7 130730070 to 130730074 4 + TSS region transcription start site region 69510
Cpgi19809 7 130766853 to 130767203 350 CpG island CpG island 19809
Gm6108 7 130766953 to 130767319 366 + pseudogene predicted gene 6108
Etos1 7 130770638 to 130772652 2014 - lincRNA gene ectopic ossification 1
Btbd16 7 130774069 to 130825899 51830 + protein coding gene BTB (POZ) domain containing 16
Tssr69511 7 130774132 to 130774185 53 + TSS region transcription start site region 69511
Tssr69512 7 130774186 to 130774193 7 + TSS region transcription start site region 69512
Tssr75165 7 130792248 to 130792255 7 - TSS region transcription start site region 75165
Tssr69513 7 130820107 to 130820140 33 + TSS region transcription start site region 69513
Tssr69514 7 130820318 to 130820329 11 + TSS region transcription start site region 69514
Tssr69515 7 130834428 to 130834457 29 + TSS region transcription start site region 69515
Tssr69516 7 130834499 to 130834533 34 + TSS region transcription start site region 69516
Tssr75166 7 130847460 to 130847465 5 - TSS region transcription start site region 75166
Tssr69517 7 130847540 to 130847585 45 + TSS region transcription start site region 69517
Tssr69518 7 130861242 to 130861252 10 + TSS region transcription start site region 69518
Tssr69519 7 130861814 to 130861827 13 + TSS region transcription start site region 69519
Gm5602 7 130862448 to 130866234 3786 - antisense lncRNA gene predicted gene 5602
Cpgi19810 7 130865586 to 130866691 1105 CpG island CpG island 19810
Tssr69520 7 130865686 to 130865688 2 + TSS region transcription start site region 69520
Plekha1 7 130865756 to 130913312 47556 + protein coding gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
Tssr69521 7 130865801 to 130865812 11 + TSS region transcription start site region 69521
Tssr69522 7 130865835 to 130865942 107 + TSS region transcription start site region 69522
Tssr69523 7 130865959 to 130865970 11 + TSS region transcription start site region 69523
Tssr75167 7 130867363 to 130867392 29 - TSS region transcription start site region 75167
Tssr69524 7 130867508 to 130867514 6 + TSS region transcription start site region 69524
Tssr69525 7 130867517 to 130867523 6 + TSS region transcription start site region 69525
Tssr69526 7 130867534 to 130867540 6 + TSS region transcription start site region 69526
Tssr69527 7 130875395 to 130875437 42 + TSS region transcription start site region 69527
Tssr69528 7 130891237 to 130891248 11 + TSS region transcription start site region 69528
Tssr69529 7 130891261 to 130891292 31 + TSS region transcription start site region 69529
Tssr69530 7 130895048 to 130895056 8 + TSS region transcription start site region 69530
Tssr69531 7 130898211 to 130898215 4 + TSS region transcription start site region 69531
Tssr69532 7 130900536 to 130900545 9 + TSS region transcription start site region 69532
Tssr69533 7 130900546 to 130900557 11 + TSS region transcription start site region 69533
Tssr69534 7 130900561 to 130900596 35 + TSS region transcription start site region 69534
Cpgi19811 7 130903595 to 130903825 230 CpG island CpG island 19811
Mir7061 7 130908268 to 130908335 67 + miRNA gene microRNA 7061
Tssr69535 7 130911408 to 130911413 5 + TSS region transcription start site region 69535