Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:127597905-127701409

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf40 7 127588698 to 127603605 14907 + protein coding gene ring finger protein 40
Tssr69265 7 127598665 to 127598668 3 + TSS region transcription start site region 69265
Tssr69266 7 127603190 to 127603209 19 + TSS region transcription start site region 69266
1700120K04Rik 7 127603903 to 127604445 542 - antisense lncRNA gene RIKEN cDNA 1700120K04 gene
Tssr75017 7 127604416 to 127604450 34 - TSS region transcription start site region 75017
Tssr75018 7 127604454 to 127604465 11 - TSS region transcription start site region 75018
Zfp629 7 127607031 to 127615785 8754 - protein coding gene zinc finger protein 629
Cpgi19756 7 127611042 to 127612180 1138 CpG island CpG island 19756
Cpgi19757 7 127614211 to 127615688 1477 CpG island CpG island 19757
Tssr75019 7 127615208 to 127615219 11 - TSS region transcription start site region 75019
Tssr75020 7 127615226 to 127615269 43 - TSS region transcription start site region 75020
Cpgi19758 7 127636960 to 127637306 346 CpG island CpG island 19758
Gm39089 7 127647905 to 127651409 3504 - lncRNA gene predicted gene, 39089
Tssr75021 7 127649345 to 127649355 10 - TSS region transcription start site region 75021
Tssr75022 7 127649370 to 127649371 1 - TSS region transcription start site region 75022
Tssr69267 7 127652125 to 127652130 5 + TSS region transcription start site region 69267
Cpgi19759 7 127652159 to 127652430 271 CpG island CpG island 19759
Gm44760 7 127657062 to 127658234 1172 - unclassified gene predicted gene 44760
Bcl7c 7 127661456 to 127708933 47477 - protein coding gene B cell CLL/lymphoma 7C
Tssr75023 7 127686826 to 127686840 14 - TSS region transcription start site region 75023
Tssr69268 7 127691658 to 127691668 10 + TSS region transcription start site region 69268
Tssr69269 7 127691924 to 127691984 60 + TSS region transcription start site region 69269
Gm39090 7 127691935 to 127700793 8858 + lincRNA gene predicted gene, 39090