Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:126837362-126957415

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm44854 7 126837212 to 126846388 9176 + lincRNA gene predicted gene 44854
Cpgi19718 7 126847179 to 126848836 1657 CpG island CpG island 19718
Doc2a 7 126847416 to 126852705 5289 + protein coding gene double C2, alpha
Tssr2400 7 126847707 to 126847759 52 + TSS region transcription start site region 2400
Tssr69099 7 126847908 to 126847919 11 + TSS region transcription start site region 69099
Ino80e 7 126851584 to 126862371 10787 - protein coding gene INO80 complex subunit E
Tssr74842 7 126857315 to 126857343 28 - TSS region transcription start site region 74842
Tssr69100 7 126861192 to 126861208 16 + TSS region transcription start site region 69100
Cpgi19719 7 126861428 to 126862790 1362 CpG island CpG island 19719
Tssr74843 7 126861690 to 126861728 38 - TSS region transcription start site region 74843
Tssr74844 7 126861807 to 126861824 17 - TSS region transcription start site region 74844
Tssr74845 7 126861828 to 126861895 67 - TSS region transcription start site region 74845
Tssr69101 7 126861920 to 126861936 16 + TSS region transcription start site region 69101
Tssr69102 7 126861947 to 126861986 39 + TSS region transcription start site region 69102
Hirip3 7 126861972 to 126865129 3157 + protein coding gene HIRA interacting protein 3
Tssr74846 7 126862350 to 126862393 43 - TSS region transcription start site region 74846
Tssr69103 7 126862431 to 126862447 16 + TSS region transcription start site region 69103
Tssr69104 7 126862572 to 126862586 14 + TSS region transcription start site region 69104
Tssr69105 7 126862587 to 126862611 24 + TSS region transcription start site region 69105
Tssr69106 7 126862630 to 126862684 54 + TSS region transcription start site region 69106
Tssr69107 7 126863332 to 126863355 23 + TSS region transcription start site region 69107
Tssr69108 7 126863424 to 126863444 20 + TSS region transcription start site region 69108
Taok2 7 126865678 to 126884703 19025 - protein coding gene TAO kinase 2
Tssr69109 7 126872359 to 126872361 2 + TSS region transcription start site region 69109
Tssr74847 7 126876060 to 126876076 16 - TSS region transcription start site region 74847
Cpgi19720 7 126883917 to 126885122 1205 CpG island CpG island 19720
Tssr74848 7 126883965 to 126884000 35 - TSS region transcription start site region 74848
Tssr74849 7 126884638 to 126884670 32 - TSS region transcription start site region 74849
Tssr74850 7 126884678 to 126884728 50 - TSS region transcription start site region 74850
Tssr74851 7 126884960 to 126884977 17 - TSS region transcription start site region 74851
Tmem219 7 126886171 to 126922917 36746 - protein coding gene transmembrane protein 219
Gm20650 7 126891622 to 126897236 5614 + unclassified non-coding RNA gene predicted gene 20650
Tssr74852 7 126897233 to 126897244 11 - TSS region transcription start site region 74852
Tssr74853 7 126897341 to 126897354 13 - TSS region transcription start site region 74853
Tssr74854 7 126897362 to 126897415 53 - TSS region transcription start site region 74854
Tssr74855 7 126897472 to 126897483 11 - TSS region transcription start site region 74855
Tssr74856 7 126897513 to 126897525 12 - TSS region transcription start site region 74856
Tssr69110 7 126897580 to 126897599 19 + TSS region transcription start site region 69110
Cpgi19721 7 126897934 to 126898479 545 CpG island CpG island 19721
Tssr74857 7 126898225 to 126898247 22 - TSS region transcription start site region 74857
Tssr74858 7 126898249 to 126898288 39 - TSS region transcription start site region 74858
Gm23445 7 126915720 to 126915826 106 - snRNA gene predicted gene, 23445
Tssr74859 7 126922847 to 126922886 39 - TSS region transcription start site region 74859
Tssr74860 7 126922887 to 126922926 39 - TSS region transcription start site region 74860
Cpgi19722 7 126928546 to 126929496 950 CpG island CpG island 19722
Tssr74861 7 126928782 to 126928814 32 - TSS region transcription start site region 74861
Tssr69111 7 126928844 to 126928899 55 + TSS region transcription start site region 69111
Kctd13 7 126928879 to 126945631 16752 + protein coding gene potassium channel tetramerisation domain containing 13
Tssr69112 7 126928900 to 126928905 5 + TSS region transcription start site region 69112
Tssr69113 7 126928909 to 126928926 17 + TSS region transcription start site region 69113
Gm44735 7 126938886 to 126940637 1751 + unclassified gene predicted gene 44735
Tssr69114 7 126941360 to 126941402 42 + TSS region transcription start site region 69114
Tssr69115 7 126941968 to 126941974 6 + TSS region transcription start site region 69115
Tssr69116 7 126942037 to 126942053 16 + TSS region transcription start site region 69116
Tssr69117 7 126942060 to 126942074 14 + TSS region transcription start site region 69117
Tssr69118 7 126942081 to 126942092 11 + TSS region transcription start site region 69118
Tssr69119 7 126942108 to 126942119 11 + TSS region transcription start site region 69119
Tssr69120 7 126942139 to 126942159 20 + TSS region transcription start site region 69120
Gm21984 7 126942144 to 126952873 10729 + unclassified non-coding RNA gene predicted gene 21984
Tssr69121 7 126945112 to 126945139 27 + TSS region transcription start site region 69121
Tssr69122 7 126945200 to 126945215 15 + TSS region transcription start site region 69122
Asphd1 7 126945567 to 126949582 4015 - protein coding gene aspartate beta-hydroxylase domain containing 1
Cpgi19723 7 126949482 to 126950138 656 CpG island CpG island 19723
Tssr74862 7 126949499 to 126949521 22 - TSS region transcription start site region 74862
Tssr74863 7 126949859 to 126949889 30 - TSS region transcription start site region 74863
Tssr74864 7 126949894 to 126949939 45 - TSS region transcription start site region 74864
Tssr69123 7 126950020 to 126950055 35 + TSS region transcription start site region 69123
Tssr69124 7 126950498 to 126950503 5 + TSS region transcription start site region 69124
Tssr69125 7 126950505 to 126950516 11 + TSS region transcription start site region 69125
Tssr69126 7 126950518 to 126950583 65 + TSS region transcription start site region 69126
Sez6l2 7 126950563 to 126970606 20043 + protein coding gene seizure related 6 homolog like 2
Tssr69127 7 126950598 to 126950609 11 + TSS region transcription start site region 69127
Tssr69128 7 126950687 to 126950698 11 + TSS region transcription start site region 69128
Tssr69129 7 126950811 to 126950829 18 + TSS region transcription start site region 69129
Tssr69130 7 126950837 to 126950848 11 + TSS region transcription start site region 69130
Tssr69131 7 126952087 to 126952098 11 + TSS region transcription start site region 69131
Tssr69132 7 126953010 to 126953026 16 + TSS region transcription start site region 69132
D7Mit188 7 126955893 to 126956036 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 188