Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:125173122-125493681

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr68964 7 125182530 to 125182549 19 + TSS region transcription start site region 68964
Gm30501 7 125210421 to 125216918 6497 + lncRNA gene predicted gene, 30501
Gm21957 7 125219449 to 125219886 437 - pseudogene predicted gene, 21957
Gm46000 7 125316661 to 125323685 7024 - lncRNA gene predicted gene, 46000
Tssr68965 7 125318334 to 125318343 9 + TSS region transcription start site region 68965
4930533L02Rik 7 125318359 to 125319518 1159 + unclassified non-coding RNA gene RIKEN cDNA 4930533L02 gene
4933440M02Rik 7 125331782 to 125349786 18004 - lincRNA gene RIKEN cDNA 4933440M02 gene
Gm39085 7 125333122 to 125333681 559 + lncRNA gene predicted gene, 39085
D7Mit68 7 125341551 to 125341734 183 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 68
Tssr74592 7 125349745 to 125349783 38 - TSS region transcription start site region 74592
Tssr74593 7 125349784 to 125349814 30 - TSS region transcription start site region 74593
Tssr68966 7 125349863 to 125349877 14 + TSS region transcription start site region 68966
4930571K23Rik 7 125368861 to 125371013 2152 + lincRNA gene RIKEN cDNA 4930571K23 gene
Tssr68967 7 125368950 to 125368961 11 + TSS region transcription start site region 68967
Tssr68968 7 125368972 to 125368983 11 + TSS region transcription start site region 68968
Tssr68969 7 125368986 to 125369003 17 + TSS region transcription start site region 68969
Cpgi19679 7 125393328 to 125394029 701 CpG island CpG island 19679
Gm30560 7 125397981 to 125405814 7833 + lncRNA gene predicted gene, 30560
Gm30717 7 125416994 to 125418114 1120 - lincRNA gene predicted gene, 30717
Tssr68970 7 125418700 to 125418726 26 + TSS region transcription start site region 68970
Cpgi19680 7 125444527 to 125445349 822 CpG island CpG island 19680
Tssr68971 7 125444635 to 125444709 74 + TSS region transcription start site region 68971
Kdm8 7 125444676 to 125462269 17593 + protein coding gene lysine (K)-specific demethylase 8
Nsmce1 7 125467640 to 125491575 23935 - protein coding gene NSE1 homolog, SMC5-SMC6 complex component
Tssr68972 7 125487410 to 125487425 15 + TSS region transcription start site region 68972
Tssr68973 7 125487660 to 125487665 5 + TSS region transcription start site region 68973
Tssr74594 7 125488742 to 125488753 11 - TSS region transcription start site region 74594
Tssr68974 7 125489005 to 125489010 5 + TSS region transcription start site region 68974
Cpgi19681 7 125491068 to 125491961 893 CpG island CpG island 19681
Tssr68975 7 125491112 to 125491130 18 + TSS region transcription start site region 68975
Tssr74595 7 125491371 to 125491383 12 - TSS region transcription start site region 74595
Tssr74596 7 125491397 to 125491413 16 - TSS region transcription start site region 74596
Tssr74597 7 125491414 to 125491458 44 - TSS region transcription start site region 74597
Tssr74598 7 125491475 to 125491486 11 - TSS region transcription start site region 74598
Tssr74599 7 125491506 to 125491520 14 - TSS region transcription start site region 74599
Tssr74600 7 125491524 to 125491539 15 - TSS region transcription start site region 74600
Tssr68976 7 125491528 to 125491565 37 + TSS region transcription start site region 68976
4921524M04Rik 7 125491554 to 125493057 1503 unclassified gene RIKEN cDNA 4921524M04 gene
Tssr74601 7 125491586 to 125491595 9 - TSS region transcription start site region 74601
Tssr74602 7 125492400 to 125492406 6 - TSS region transcription start site region 74602
Tssr74603 7 125492543 to 125492590 47 - TSS region transcription start site region 74603