Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:12501706-12834991

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr64474 7 12512488 to 12512512 24 + TSS region transcription start site region 64474
Tssr64475 7 12512513 to 12512520 7 + TSS region transcription start site region 64475
2900092C05Rik 7 12512517 to 12556323 43806 + protein coding gene RIKEN cDNA 2900092C05 gene
Tssr64476 7 12512522 to 12512540 18 + TSS region transcription start site region 64476
Gm15877 7 12517405 to 12518368 963 + pseudogene predicted gene 15877
Gm45475 7 12559860 to 12560168 308 + pseudogene predicted gene 45475
Vmn2r53 7 12581470 to 12606544 25074 - protein coding gene vomeronasal 2, receptor 53
Gm15773 7 12603196 to 12604643 1447 + pseudogene predicted gene 15773
Tssr64477 7 12603573 to 12603600 27 + TSS region transcription start site region 64477
Tssr64478 7 12603725 to 12603730 5 + TSS region transcription start site region 64478
Vmn2r54 7 12615233 to 12636134 20901 - protein coding gene vomeronasal 2, receptor 54
Vmn2r55 7 12651706 to 12684991 33285 - protein coding gene vomeronasal 2, receptor 55
Vmn2r56 7 12693860 to 12733320 39460 - protein coding gene vomeronasal 2, receptor 56
Gm6946 7 12742686 to 12743672 986 + pseudogene predicted gene 6946
Gm18205 7 12760708 to 12761548 840 + pseudogene predicted gene, 18205
Zscan18 7 12768090 to 12803635 35545 - protein coding gene zinc finger and SCAN domain containing 18
Cpgi18315 7 12779893 to 12781118 1225 CpG island CpG island 18315
Tssr70621 7 12780607 to 12780679 72 - TSS region transcription start site region 70621
1700047O18Rik 7 12780860 to 12781602 742 + unclassified gene RIKEN cDNA 1700047O18 gene
Gm4247 7 12793828 to 12794869 1041 - pseudogene predicted gene 4247
Gm18194 7 12796855 to 12797491 636 - pseudogene predicted gene, 18194
Gm45315 7 12797529 to 12797861 332 + pseudogene predicted gene 45315
Cpgi18316 7 12803219 to 12803956 737 CpG island CpG island 18316
A930003G23Rik 7 12803545 to 12804778 1233 unclassified gene RIKEN cDNA A930003G23 gene
Tssr70622 7 12803607 to 12803644 37 - TSS region transcription start site region 70622
Zfp329 7 12804977 to 12818858 13881 - protein coding gene zinc finger protein 329
Tssr70623 7 12807309 to 12807314 5 - TSS region transcription start site region 70623
Cpgi18317 7 12818398 to 12819011 613 CpG island CpG island 18317
Tssr70624 7 12818837 to 12818865 28 - TSS region transcription start site region 70624
Tssr70625 7 12818866 to 12818871 5 - TSS region transcription start site region 70625
Gm45593 7 12825918 to 12828121 2203 + lincRNA gene predicted gene 45593
Cpgi18318 7 12834551 to 12835419 868 CpG island CpG island 18318
Tssr64479 7 12834743 to 12834811 68 + TSS region transcription start site region 64479
Zfp110 7 12834810 to 12850584 15774 + protein coding gene zinc finger protein 110
Tssr64480 7 12834973 to 12835052 79 + TSS region transcription start site region 64480