Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:118854548-119514572

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lskcn2 7 108883789 to 119094307 10210518 QTL LSK cell number 2
Knop1 7 118842217 to 118855998 13781 - protein coding gene lysine rich nucleolar protein 1
Cpgi19628 7 118855109 to 118856379 1270 CpG island CpG island 19628
Tssr74457 7 118855649 to 118855695 46 - TSS region transcription start site region 74457
Tssr68731 7 118855735 to 118855798 63 + TSS region transcription start site region 68731
Iqck 7 118855753 to 118972652 116899 + protein coding gene IQ motif containing K
Tssr74458 7 118855951 to 118855960 9 - TSS region transcription start site region 74458
Tssr74459 7 118855974 to 118855981 7 - TSS region transcription start site region 74459
Tssr74460 7 118855984 to 118856014 30 - TSS region transcription start site region 74460
Tssr74461 7 118856017 to 118856020 3 - TSS region transcription start site region 74461
Tssr74462 7 118856033 to 118856040 7 - TSS region transcription start site region 74462
Tssr74463 7 118856361 to 118856373 12 - TSS region transcription start site region 74463
Tssr68732 7 118912617 to 118912641 24 + TSS region transcription start site region 68732
Tssr68733 7 118937076 to 118937083 7 + TSS region transcription start site region 68733
Tssr68734 7 118937120 to 118937123 3 + TSS region transcription start site region 68734
Gm44763 7 118967668 to 118969686 2018 - antisense lncRNA gene predicted gene 44763
Gprc5b 7 118972047 to 118995211 23164 - protein coding gene G protein-coupled receptor, family C, group 5, member B
Tssr74464 7 118973712 to 118973716 4 - TSS region transcription start site region 74464
Tssr74465 7 118974618 to 118974631 13 - TSS region transcription start site region 74465
Tssr2385 7 118974763 to 118974787 24 - TSS region transcription start site region 2385
Tssr74466 7 118974958 to 118974979 21 - TSS region transcription start site region 74466
Tssr74467 7 118976674 to 118976691 17 - TSS region transcription start site region 74467
Tssr74468 7 118976698 to 118976729 31 - TSS region transcription start site region 74468
Tssr74469 7 118976801 to 118976828 27 - TSS region transcription start site region 74469
Tssr74470 7 118983751 to 118983759 8 - TSS region transcription start site region 74470
Cpgi19629 7 118983928 to 118984555 627 CpG island CpG island 19629
Tssr74471 7 118984038 to 118984069 31 - TSS region transcription start site region 74471
Tssr74472 7 118984077 to 118984101 24 - TSS region transcription start site region 74472
Gm39076 7 118985040 to 118988595 3555 + lncRNA gene predicted gene, 39076
Cpgi19630 7 118993959 to 118995994 2035 CpG island CpG island 19630
Tssr74473 7 118995066 to 118995079 13 - TSS region transcription start site region 74473
Tssr74474 7 118995091 to 118995105 14 - TSS region transcription start site region 74474
Tssr74475 7 118995142 to 118995203 61 - TSS region transcription start site region 74475
Tssr74476 7 118995212 to 118995219 7 - TSS region transcription start site region 74476
Cfld4 7 119094158 to 119094307 149 QTL cystic fibrosis lung disease 4
Cfbw3 7 119094158 to 119094307 149 QTL cystic fibrosis body weight 3
Adbg1 7 119094158 to 144844577 25750419 QTL adult body growth 1
Vtbt4 7 119094158 to 119094307 149 QTL vertebral trabecular bone trait 4
D7Mit238 7 119094158 to 119094307 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 238
Bw1n 7 119094307 to 45512542 -73581765 QTL body weight 1 in NSY
Gpr139 7 119144323 to 119184374 40051 - protein coding gene G protein-coupled receptor 139
Cpgi19631 7 119184166 to 119184793 627 CpG island CpG island 19631
Tssr74477 7 119184527 to 119184546 19 - TSS region transcription start site region 74477
Tssr74478 7 119184548 to 119184572 24 - TSS region transcription start site region 74478
Tssr74479 7 119184598 to 119184619 21 - TSS region transcription start site region 74479
Cpgi19632 7 119185280 to 119185559 279 CpG island CpG island 19632
Stmm2a 7 119283163 to 119283163 0 QTL skin tumor modifier of MSM 2a
Gm4083 7 119301257 to 119301707 450 - pseudogene predicted gene 4083
Gm23321 7 119306123 to 119306248 125 - snoRNA gene predicted gene, 23321
Gp2 7 119442542 to 119459272 16730 - protein coding gene glycoprotein 2 (zymogen granule membrane)
Tssr74480 7 119459266 to 119459280 14 - TSS region transcription start site region 74480
Umod 7 119462708 to 119479262 16554 - protein coding gene uromodulin
Gm44588 7 119462821 to 119472478 9657 + antisense lncRNA gene predicted gene 44588
Tssr74481 7 119472498 to 119472509 11 - TSS region transcription start site region 74481
Cpgi19633 7 119476556 to 119477150 594 CpG island CpG island 19633
Tssr74482 7 119476798 to 119476808 10 - TSS region transcription start site region 74482
Tssr74483 7 119476811 to 119476819 8 - TSS region transcription start site region 74483
Tssr68735 7 119476943 to 119476945 2 + TSS region transcription start site region 68735
Tssr74484 7 119479169 to 119479185 16 - TSS region transcription start site region 74484
Tssr74485 7 119479249 to 119479260 11 - TSS region transcription start site region 74485
Tssr2386 7 119479366 to 119479402 36 - TSS region transcription start site region 2386
Pdilt 7 119486587 to 119523489 36902 - protein coding gene protein disulfide isomerase-like, testis expressed
Gm37518 7 119498677 to 119501279 2602 + unclassified gene predicted gene, 37518
Gm26967 7 119512000 to 119514302 2302 - sense intronic lncRNA gene predicted gene, 26967