MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 7:118234866-118375064

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Smg1	7	118131308 to 118243657	112349	-	protein coding gene	SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)
Cpgi19616	7	118242888 to 118244387	1499		CpG island	CpG island 19616
Tssr74428	7	118243362 to 118243412	50	-	TSS region	transcription start site region 74428
Tssr74429	7	118243525 to 118243536	11	-	TSS region	transcription start site region 74429
Tssr74430	7	118243564 to 118243641	77	-	TSS region	transcription start site region 74430
Tssr74431	7	118243669 to 118243686	17	-	TSS region	transcription start site region 74431
Tssr68712	7	118243860 to 118243871	11	+	TSS region	transcription start site region 68712
4930583K01Rik	7	118243907 to 118245551	1644	+	bidirectional promoter lncRNA gene	RIKEN cDNA 4930583K01 gene
Gm34999	7	118259483 to 118280424	20941	+	lncRNA gene	predicted gene, 34999
Gm45155	7	118273292 to 118275363	2071	-	lincRNA gene	predicted gene 45155
Tssr74432	7	118275381 to 118275437	56	-	TSS region	transcription start site region 74432
Gm23229	7	118279861 to 118279965	104	+	snRNA gene	predicted gene, 23229
Cpgi19617	7	118304866 to 118305064	198		CpG island	CpG island 19617
Gm35083	7	118323100 to 118328648	5548	-	protein coding gene	predicted gene, 35083
Tssr74433	7	118326909 to 118326926	17	-	TSS region	transcription start site region 74433
Tssr68713	7	118329453 to 118329465	12	+	TSS region	transcription start site region 68713
Gm35309	7	118329486 to 118330121	635	+	lincRNA gene	predicted gene, 35309
Gm32766	7	118358170 to 118370075	11905	-	protein coding gene	predicted gene, 32766