Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101233324-101843370

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133 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fchsd2 7 101108711 to 101284405 175694 + protein coding gene FCH and double SH3 domains 2
Gm47324 7 101238218 to 101239278 1060 + pseudogene predicted gene, 47324
Tssr68206 7 101241056 to 101241061 5 + TSS region transcription start site region 68206
Atg16l2 7 101286325 to 101302267 15942 - protein coding gene autophagy related 16-like 2 (S. cerevisiae)
Tssr73825 7 101293479 to 101293483 4 - TSS region transcription start site region 73825
Cpgi19498 7 101296565 to 101297311 746 CpG island CpG island 19498
Cpgi19499 7 101301270 to 101302368 1098 CpG island CpG island 19499
Tssr68207 7 101301421 to 101301433 12 + TSS region transcription start site region 68207
Tssr73826 7 101301657 to 101301671 14 - TSS region transcription start site region 73826
Tssr73827 7 101301683 to 101301697 14 - TSS region transcription start site region 73827
Tssr73828 7 101301699 to 101301711 12 - TSS region transcription start site region 73828
Tssr73829 7 101301723 to 101301744 21 - TSS region transcription start site region 73829
Tssr68208 7 101301868 to 101301901 33 + TSS region transcription start site region 68208
Tssr73830 7 101302020 to 101302082 62 - TSS region transcription start site region 73830
Cpgi19500 7 101310459 to 101311024 565 CpG island CpG island 19500
Tssr68209 7 101317052 to 101317057 5 + TSS region transcription start site region 68209
Tssr68210 7 101317073 to 101317132 59 + TSS region transcription start site region 68210
Stard10 7 101317091 to 101346312 29221 + protein coding gene START domain containing 10
Gm20476 7 101317724 to 101326231 8507 - antisense lncRNA gene predicted gene 20476
Tssr68211 7 101320626 to 101320637 11 + TSS region transcription start site region 68211
Cpgi19501 7 101320716 to 101322201 1485 CpG island CpG island 19501
Tssr68212 7 101321079 to 101321134 55 + TSS region transcription start site region 68212
Tssr68213 7 101321138 to 101321149 11 + TSS region transcription start site region 68213
Tssr68214 7 101321230 to 101321320 90 + TSS region transcription start site region 68214
Tssr68215 7 101321703 to 101321790 87 + TSS region transcription start site region 68215
Tssr68216 7 101321858 to 101321869 11 + TSS region transcription start site region 68216
Tssr68217 7 101324402 to 101324405 3 + TSS region transcription start site region 68217
Tssr68218 7 101330353 to 101330368 15 + TSS region transcription start site region 68218
Tssr68219 7 101332857 to 101332859 2 + TSS region transcription start site region 68219
Gm45344 7 101338127 to 101338467 340 + pseudogene predicted gene 45344
Tssr68220 7 101345968 to 101345977 9 + TSS region transcription start site region 68220
Gm45620 7 101347409 to 101347984 575 - lincRNA gene predicted gene 45620
Cpgi19502 7 101347785 to 101348569 784 CpG island CpG island 19502
Tssr73831 7 101347984 to 101348014 30 - TSS region transcription start site region 73831
Tssr68221 7 101348061 to 101348128 67 + TSS region transcription start site region 68221
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Tssr68222 7 101348140 to 101348149 9 + TSS region transcription start site region 68222
Gm35219 7 101348208 to 101355423 7215 - lncRNA gene predicted gene, 35219
Gm45548 7 101351273 to 101354439 3166 - unclassified gene predicted gene 45548
Tssr73832 7 101354415 to 101354422 7 - TSS region transcription start site region 73832
Tssr73833 7 101354431 to 101354446 15 - TSS region transcription start site region 73833
D7Mit138 7 101357379 to 101357492 113 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 138
Tssr68223 7 101361250 to 101361287 37 + TSS region transcription start site region 68223
Tssr68224 7 101361465 to 101361507 42 + TSS region transcription start site region 68224
Tssr73834 7 101361864 to 101361888 24 - TSS region transcription start site region 73834
Tssr73835 7 101361913 to 101361930 17 - TSS region transcription start site region 73835
Tssr68225 7 101361967 to 101361978 11 + TSS region transcription start site region 68225
Tssr68226 7 101361979 to 101361988 9 + TSS region transcription start site region 68226
Tssr68227 7 101361997 to 101362044 47 + TSS region transcription start site region 68227
Tssr68228 7 101362054 to 101362069 15 + TSS region transcription start site region 68228
Tssr73836 7 101362770 to 101362780 10 - TSS region transcription start site region 73836
Tssr73837 7 101362813 to 101362818 5 - TSS region transcription start site region 73837
Tssr73838 7 101362871 to 101362884 13 - TSS region transcription start site region 73838
Tssr68229 7 101363043 to 101363090 47 + TSS region transcription start site region 68229
Tssr68230 7 101366572 to 101366593 21 + TSS region transcription start site region 68230
Cpgi19503 7 101373066 to 101373277 211 CpG island CpG island 19503
Tssr68231 7 101373199 to 101373231 32 + TSS region transcription start site region 68231
Tssr68232 7 101373271 to 101373284 13 + TSS region transcription start site region 68232
Tssr68233 7 101373309 to 101373341 32 + TSS region transcription start site region 68233
Tssr68234 7 101378110 to 101378133 23 + TSS region transcription start site region 68234
Tssr68235 7 101378183 to 101378210 27 + TSS region transcription start site region 68235
Tssr73839 7 101379884 to 101379898 14 - TSS region transcription start site region 73839
Tssr68236 7 101382814 to 101382840 26 + TSS region transcription start site region 68236
Tssr68237 7 101383947 to 101383962 15 + TSS region transcription start site region 68237
Tssr68238 7 101383969 to 101383976 7 + TSS region transcription start site region 68238
Tssr68239 7 101383985 to 101384000 15 + TSS region transcription start site region 68239
Tssr68240 7 101384011 to 101384038 27 + TSS region transcription start site region 68240
Tssr68241 7 101384050 to 101384075 25 + TSS region transcription start site region 68241
Tssr68242 7 101384872 to 101384887 15 + TSS region transcription start site region 68242
Tssr68243 7 101384888 to 101384911 23 + TSS region transcription start site region 68243
Tssr68244 7 101385523 to 101385552 29 + TSS region transcription start site region 68244
Tssr68245 7 101386785 to 101386800 15 + TSS region transcription start site region 68245
Tssr68246 7 101394361 to 101394436 75 + TSS region transcription start site region 68246
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261
Tssr68262 7 101763517 to 101763524 7 + TSS region transcription start site region 68262
Tssr68263 7 101765492 to 101765493 1 + TSS region transcription start site region 68263
Gm45380 7 101790536 to 101790850 314 + pseudogene predicted gene 45380
Cpgi19508 7 101817108 to 101817312 204 CpG island CpG island 19508
Cpgi19509 7 101817732 to 101818926 1194 CpG island CpG island 19509
Tssr68264 7 101818306 to 101818321 15 + TSS region transcription start site region 68264
Phox2a 7 101818313 to 101822726 4413 + protein coding gene paired-like homeobox 2a
Cpgi19510 7 101820672 to 101822524 1852 CpG island CpG island 19510
Tssr68265 7 101820735 to 101820755 20 + TSS region transcription start site region 68265
Inppl1 7 101822632 to 101838226 15594 - protein coding gene inositol polyphosphate phosphatase-like 1
Tssr73848 7 101832925 to 101832963 38 - TSS region transcription start site region 73848
Cpgi19511 7 101836343 to 101838282 1939 CpG island CpG island 19511
Gm10602 7 101836503 to 101842771 6268 + antisense lncRNA gene predicted gene 10602
Tssr68266 7 101836588 to 101836640 52 + TSS region transcription start site region 68266
Tssr73849 7 101836935 to 101836988 53 - TSS region transcription start site region 73849
Tssr68267 7 101837063 to 101837094 31 + TSS region transcription start site region 68267
Tssr73850 7 101837735 to 101837768 33 - TSS region transcription start site region 73850
Tssr73851 7 101837776 to 101837832 56 - TSS region transcription start site region 73851
Tssr68268 7 101837838 to 101837897 59 + TSS region transcription start site region 68268
Tssr73852 7 101837875 to 101837958 83 - TSS region transcription start site region 73852
Tssr73853 7 101837999 to 101838014 15 - TSS region transcription start site region 73853
Folr2 7 101839988 to 101857190 17202 - protein coding gene folate receptor 2 (fetal)