Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:100560805-100961806

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112 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mrpl48 7 100549117 to 100607996 58879 - protein coding gene mitochondrial ribosomal protein L48
Gm44648 7 100571922 to 100572250 328 + pseudogene predicted gene 44648
Cox20b 7 100580267 to 100580619 352 + pseudogene cytochrome c oxidase assembly protein 20B
Tssr68159 7 100580278 to 100580302 24 + TSS region transcription start site region 68159
Cpgi19486 7 100582715 to 100583183 468 CpG island CpG island 19486
Tssr73758 7 100583072 to 100583124 52 - TSS region transcription start site region 73758
Tssr73759 7 100589945 to 100589993 48 - TSS region transcription start site region 73759
Tssr73760 7 100590852 to 100590862 10 - TSS region transcription start site region 73760
Cpgi19487 7 100607071 to 100608710 1639 CpG island CpG island 19487
Tssr68160 7 100607556 to 100607618 62 + TSS region transcription start site region 68160
Rab6a 7 100607586 to 100641268 33682 + protein coding gene RAB6A, member RAS oncogene family
Tssr73761 7 100607658 to 100607692 34 - TSS region transcription start site region 73761
Tssr68161 7 100607660 to 100607823 163 + TSS region transcription start site region 68161
Tssr68162 7 100607836 to 100607854 18 + TSS region transcription start site region 68162
Tssr68163 7 100607887 to 100607899 12 + TSS region transcription start site region 68163
Tssr68164 7 100607912 to 100607992 80 + TSS region transcription start site region 68164
Tssr73762 7 100608229 to 100608268 39 - TSS region transcription start site region 73762
Tssr73763 7 100608293 to 100608308 15 - TSS region transcription start site region 73763
D930046H04Rik 7 100618772 to 100621256 2484 unclassified non-coding RNA gene RIKEN cDNA D930046H04 gene
Gm14382 7 100624518 to 100624954 436 + pseudogene predicted gene 14382
Tssr68165 7 100639304 to 100639313 9 + TSS region transcription start site region 68165
Tssr68166 7 100640560 to 100640583 23 + TSS region transcription start site region 68166
Plekhb1 7 100643896 to 100662394 18498 - protein coding gene pleckstrin homology domain containing, family B (evectins) member 1
Tssr73764 7 100644918 to 100644931 13 - TSS region transcription start site region 73764
Tssr73765 7 100653396 to 100653401 5 - TSS region transcription start site region 73765
Tssr73766 7 100653951 to 100653965 14 - TSS region transcription start site region 73766
Tssr73767 7 100656831 to 100656834 3 - TSS region transcription start site region 73767
Tssr73768 7 100656857 to 100656868 11 - TSS region transcription start site region 73768
Tssr73769 7 100656893 to 100656914 21 - TSS region transcription start site region 73769
Tssr73770 7 100656916 to 100656942 26 - TSS region transcription start site region 73770
Tssr73771 7 100656959 to 100656985 26 - TSS region transcription start site region 73771
Tssr73772 7 100658345 to 100658356 11 - TSS region transcription start site region 73772
Tssr73773 7 100658369 to 100658386 17 - TSS region transcription start site region 73773
Tssr73774 7 100658394 to 100658451 57 - TSS region transcription start site region 73774
Tssr2343 7 100658406 to 100658411 5 + TSS region transcription start site region 2343
Tssr73775 7 100662331 to 100662362 31 - TSS region transcription start site region 73775
Tssr73776 7 100662376 to 100662395 19 - TSS region transcription start site region 73776
Tssr73777 7 100662431 to 100662440 9 - TSS region transcription start site region 73777
Tssr73778 7 100664303 to 100664313 10 - TSS region transcription start site region 73778
Gm35082 7 100675088 to 100677760 2672 + lincRNA gene predicted gene, 35082
Tssr2344 7 100681302 to 100681310 8 + TSS region transcription start site region 2344
Tssr73779 7 100706274 to 100706284 10 - TSS region transcription start site region 73779
Cpgi19488 7 100706365 to 100707144 779 CpG island CpG island 19488
Tssr68167 7 100706606 to 100706619 13 + TSS region transcription start site region 68167
Tssr68168 7 100706623 to 100706668 45 + TSS region transcription start site region 68168
Fam168a 7 100706640 to 100841646 135006 + protein coding gene family with sequence similarity 168, member A
Tssr68169 7 100706669 to 100706695 26 + TSS region transcription start site region 68169
Tssr68170 7 100706705 to 100706731 26 + TSS region transcription start site region 68170
Tssr2345 7 100706737 to 100706762 25 + TSS region transcription start site region 2345
Tssr68171 7 100706773 to 100706785 12 + TSS region transcription start site region 68171
Tssr68172 7 100706798 to 100706809 11 + TSS region transcription start site region 68172
Tssr2346 7 100706812 to 100706842 30 + TSS region transcription start site region 2346
Tssr2347 7 100706848 to 100706854 6 + TSS region transcription start site region 2347
Gm45209 7 100738052 to 100738628 576 - pseudogene predicted gene 45209
Gm3200 7 100760805 to 100761806 1001 - pseudogene predicted pseudogene 3200
Tssr68173 7 100786341 to 100786374 33 + TSS region transcription start site region 68173
Tssr68174 7 100786852 to 100786856 4 + TSS region transcription start site region 68174
Tssr68175 7 100806607 to 100806619 12 + TSS region transcription start site region 68175
Gm44953 7 100811352 to 100812637 1285 + unclassified gene predicted gene 44953
Tssr68176 7 100816150 to 100816169 19 + TSS region transcription start site region 68176
Tssr68177 7 100831363 to 100831399 36 + TSS region transcription start site region 68177
Tssr68178 7 100834004 to 100834019 15 + TSS region transcription start site region 68178
Tssr68179 7 100839032 to 100839055 23 + TSS region transcription start site region 68179
Relt 7 100845847 to 100863446 17599 - protein coding gene RELT tumor necrosis factor receptor
Tssr73780 7 100855403 to 100855440 37 - TSS region transcription start site region 73780
Tssr73781 7 100855891 to 100855903 12 - TSS region transcription start site region 73781
Tssr73782 7 100856289 to 100856308 19 - TSS region transcription start site region 73782
Tssr73783 7 100856312 to 100856326 14 - TSS region transcription start site region 73783
Cpgi19489 7 100862526 to 100863638 1112 CpG island CpG island 19489
Tssr68180 7 100862736 to 100862741 5 + TSS region transcription start site region 68180
Tssr73784 7 100863353 to 100863368 15 - TSS region transcription start site region 73784
Tssr73785 7 100863373 to 100863426 53 - TSS region transcription start site region 73785
Arhgef17 7 100869752 to 100932107 62355 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 17
D7Mit323 7 100875936 to 100876050 114 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 323
Mir3102 7 100882306 to 100882409 103 - miRNA gene microRNA 3102
Cpgi19490 7 100893974 to 100895101 1127 CpG island CpG island 19490
Tssr68181 7 100894501 to 100894503 2 + TSS region transcription start site region 68181
Tssr73786 7 100894573 to 100894584 11 - TSS region transcription start site region 73786
Tssr73787 7 100894608 to 100894630 22 - TSS region transcription start site region 73787
Tssr73788 7 100894684 to 100894729 45 - TSS region transcription start site region 73788
Tssr73789 7 100894745 to 100894766 21 - TSS region transcription start site region 73789
Tssr73790 7 100928604 to 100928624 20 - TSS region transcription start site region 73790
Cpgi19491 7 100930358 to 100933063 2705 CpG island CpG island 19491
Tssr73791 7 100930912 to 100930954 42 - TSS region transcription start site region 73791
Tssr73792 7 100930961 to 100930974 13 - TSS region transcription start site region 73792
Tssr73793 7 100931482 to 100931533 51 - TSS region transcription start site region 73793
Tssr73794 7 100932140 to 100932200 60 - TSS region transcription start site region 73794
Tssr73795 7 100932534 to 100932570 36 - TSS region transcription start site region 73795
P2ry6 7 100937630 to 100974649 37019 - protein coding gene pyrimidinergic receptor P2Y, G-protein coupled, 6
Cpgi19492 7 100938195 to 100939262 1067 CpG island CpG island 19492
Tssr73796 7 100938210 to 100938226 16 - TSS region transcription start site region 73796
Tssr73797 7 100938282 to 100938291 9 - TSS region transcription start site region 73797
Tssr73798 7 100938431 to 100938445 14 - TSS region transcription start site region 73798
Tssr73799 7 100938799 to 100938819 20 - TSS region transcription start site region 73799
Tssr73800 7 100938828 to 100938890 62 - TSS region transcription start site region 73800
Tssr68182 7 100938880 to 100938916 36 + TSS region transcription start site region 68182
Tssr73801 7 100938897 to 100939016 119 - TSS region transcription start site region 73801
Tssr73802 7 100939027 to 100939049 22 - TSS region transcription start site region 73802
Tssr73803 7 100939106 to 100939125 19 - TSS region transcription start site region 73803
Tssr73804 7 100939128 to 100939144 16 - TSS region transcription start site region 73804
Tssr73805 7 100939952 to 100939971 19 - TSS region transcription start site region 73805
Tssr68183 7 100943547 to 100943557 10 + TSS region transcription start site region 68183
Tssr68184 7 100943609 to 100943621 12 + TSS region transcription start site region 68184
Tssr73806 7 100947530 to 100947557 27 - TSS region transcription start site region 73806
Tssr73807 7 100947608 to 100947642 34 - TSS region transcription start site region 73807
Gm44545 7 100950817 to 100951562 745 + unclassified gene predicted gene 44545
Tssr68185 7 100950817 to 100950828 11 + TSS region transcription start site region 68185
Tssr73808 7 100954718 to 100954734 16 - TSS region transcription start site region 73808
Tssr73809 7 100955039 to 100955050 11 - TSS region transcription start site region 73809
Tssr73810 7 100956118 to 100956132 14 - TSS region transcription start site region 73810
Tssr73811 7 100958414 to 100958418 4 - TSS region transcription start site region 73811
Tssr73812 7 100959650 to 100959694 44 - TSS region transcription start site region 73812