Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:92734941-93657851

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bbaa20 6 71322621 to 93464093 22141472 QTL B.burgdorferi-associated arthritis 20
Adamts9 6 92772699 to 92943492 170793 - protein coding gene a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 9
Tssr62132 6 92773333 to 92773338 5 - TSS region transcription start site region 62132
Tssr57792 6 92816433 to 92816455 22 + TSS region transcription start site region 57792
Tssr57793 6 92816460 to 92816483 23 + TSS region transcription start site region 57793
Tssr57794 6 92816489 to 92816498 9 + TSS region transcription start site region 57794
A730049H05Rik 6 92816578 to 92847176 30598 + protein coding gene RIKEN cDNA A730049H05 gene
Tssr62133 6 92816636 to 92816655 19 - TSS region transcription start site region 62133
Tssr57795 6 92827634 to 92827663 29 + TSS region transcription start site region 57795
Tssr57796 6 92827672 to 92827685 13 + TSS region transcription start site region 57796
Tssr57797 6 92827725 to 92827747 22 + TSS region transcription start site region 57797
Tssr57798 6 92827779 to 92827790 11 + TSS region transcription start site region 57798
Tssr62134 6 92857026 to 92857031 5 - TSS region transcription start site region 62134
Tssr62135 6 92860431 to 92860447 16 - TSS region transcription start site region 62135
Tssr62136 6 92860494 to 92860509 15 - TSS region transcription start site region 62136
Gm15737 6 92869357 to 92884411 15054 + protein coding gene predicted gene 15737
Tssr62137 6 92870105 to 92870107 2 - TSS region transcription start site region 62137
Tssr62138 6 92908343 to 92908347 4 - TSS region transcription start site region 62138
Tssr62139 6 92918067 to 92918085 18 - TSS region transcription start site region 62139
Cpgi17752 6 92940535 to 92941364 829 CpG island CpG island 17752
Tssr57799 6 92940572 to 92940592 20 + TSS region transcription start site region 57799
9530026P05Rik 6 92940582 to 93111749 171167 + antisense lncRNA gene RIKEN cDNA 9530026P05 gene
Tssr57800 6 92940594 to 92940619 25 + TSS region transcription start site region 57800
Cpgi17753 6 92941400 to 92941680 280 CpG island CpG island 17753
Cpgi17754 6 92942020 to 92942417 397 CpG island CpG island 17754
Cpgi17755 6 92942935 to 92943977 1042 CpG island CpG island 17755
Tssr62140 6 92943370 to 92943382 12 - TSS region transcription start site region 62140
Tssr62141 6 92943485 to 92943507 22 - TSS region transcription start site region 62141
Tssr62142 6 92943513 to 92943539 26 - TSS region transcription start site region 62142
D630004L18Rik 6 92963853 to 92964660 807 unclassified gene RIKEN cDNA D630004L18 gene
Tssr62143 6 92988202 to 92988212 10 - TSS region transcription start site region 62143
Tssr62144 6 92988266 to 92988270 4 - TSS region transcription start site region 62144
Tssr57801 6 93018520 to 93018524 4 + TSS region transcription start site region 57801
Tssr57802 6 93034959 to 93034964 5 + TSS region transcription start site region 57802
Gm44224 6 93079108 to 93080570 1462 + unclassified gene predicted gene, 44224
Gm5313 6 93137004 to 93137990 986 - pseudogene predicted gene 5313
Gm38863 6 93194131 to 93238995 44864 + lncRNA gene predicted gene, 38863
Gm43923 6 93194941 to 93197851 2910 + unclassified gene predicted gene, 43923
Tssr57803 6 93234056 to 93234069 13 + TSS region transcription start site region 57803
Gm44220 6 93241720 to 93244206 2486 + unclassified gene predicted gene, 44220
Tssr57804 6 93241982 to 93241987 5 + TSS region transcription start site region 57804
Gm21052 6 93278033 to 93279705 1672 + pseudogene predicted gene, 21052
Gm46968 6 93299147 to 93314734 15587 - lncRNA gene predicted gene, 46968
Gm25094 6 93335458 to 93335588 130 - snoRNA gene predicted gene, 25094
D6Mit285 6 93426700 to 93426834 134 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 285
Tssr57805 6 93452322 to 93452325 3 + TSS region transcription start site region 57805
Gm44181 6 93455075 to 93455557 482 - unclassified gene predicted gene, 44181
Pfat2 6 93463949 to 93464093 144 QTL predicted fat percentage 2
D6Mit102 6 93463949 to 93464093 144 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 102
D6Dcr22 6 93463949 to 93464097 148 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 22
Gm22312 6 93509573 to 93509702 129 + snoRNA gene predicted gene, 22312
D6Mit177 6 93533087 to 93533275 188 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 177
Gm7812 6 93649352 to 93650225 873 - pseudogene predicted gene 7812