Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:91757328-92427334

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96 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
wa1l 6 78629504 to 92040033 13410529 heritable phenotypic marker waved 1-like
Slc6a6 6 91684053 to 91759066 75013 + protein coding gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Tssr57753 6 91757819 to 91757829 10 + TSS region transcription start site region 57753
Tssr57754 6 91757918 to 91757925 7 + TSS region transcription start site region 57754
Tssr57755 6 91758009 to 91758021 12 + TSS region transcription start site region 57755
Tssr57756 6 91758042 to 91758061 19 + TSS region transcription start site region 57756
Tssr57757 6 91758079 to 91758086 7 + TSS region transcription start site region 57757
Tssr57758 6 91758110 to 91758122 12 + TSS region transcription start site region 57758
Tssr62095 6 91758326 to 91758352 26 - TSS region transcription start site region 62095
Tssr57759 6 91758335 to 91758346 11 + TSS region transcription start site region 57759
Tssr57760 6 91758391 to 91758402 11 + TSS region transcription start site region 57760
Tssr57761 6 91758408 to 91758419 11 + TSS region transcription start site region 57761
Tssr57762 6 91758436 to 91758460 24 + TSS region transcription start site region 57762
Tssr57763 6 91758463 to 91758484 21 + TSS region transcription start site region 57763
Tssr57764 6 91758488 to 91758508 20 + TSS region transcription start site region 57764
Tssr57765 6 91758528 to 91758541 13 + TSS region transcription start site region 57765
Tssr57766 6 91758550 to 91758567 17 + TSS region transcription start site region 57766
Tssr62096 6 91758601 to 91758634 33 - TSS region transcription start site region 62096
Tssr57767 6 91758617 to 91758638 21 + TSS region transcription start site region 57767
Tssr57768 6 91758640 to 91758648 8 + TSS region transcription start site region 57768
Tssr62097 6 91758816 to 91758841 25 - TSS region transcription start site region 62097
Tssr57769 6 91758832 to 91758848 16 + TSS region transcription start site region 57769
Tssr57770 6 91758939 to 91758959 20 + TSS region transcription start site region 57770
Grip2 6 91761509 to 91827250 65741 - protein coding gene glutamate receptor interacting protein 2
Tssr62098 6 91796241 to 91796249 8 - TSS region transcription start site region 62098
Tssr62099 6 91796250 to 91796266 16 - TSS region transcription start site region 62099
Cpgi17742 6 91807198 to 91807539 341 CpG island CpG island 17742
Tssr62100 6 91807390 to 91807411 21 - TSS region transcription start site region 62100
Tssr62101 6 91807424 to 91807456 32 - TSS region transcription start site region 62101
Cpgi17743 6 91843056 to 91844203 1147 CpG island CpG island 17743
Tssr62102 6 91843876 to 91843915 39 - TSS region transcription start site region 62102
Gm44712 6 91876910 to 91877985 1075 - unclassified gene predicted gene 44712
Cpgi17744 6 91877809 to 91878569 760 CpG island CpG island 17744
Tssr57771 6 91878034 to 91878089 55 + TSS region transcription start site region 57771
Ccdc174 6 91878053 to 91899843 21790 + protein coding gene coiled-coil domain containing 174
4930590J08Rik 6 91902809 to 91950725 47916 + protein coding gene RIKEN cDNA 4930590J08 gene
Tssr57772 6 91904212 to 91904273 61 + TSS region transcription start site region 57772
Tssr57773 6 91904276 to 91904281 5 + TSS region transcription start site region 57773
Gm44711 6 91938250 to 91939513 1263 - unclassified gene predicted gene 44711
Tssr57774 6 91939001 to 91939003 2 + TSS region transcription start site region 57774
Cpgi17745 6 91978405 to 91979650 1245 CpG island CpG island 17745
Tssr57775 6 91978851 to 91978913 62 + TSS region transcription start site region 57775
Fgd5 6 91978878 to 92076004 97126 + protein coding gene FYVE, RhoGEF and PH domain containing 5
Tssr57776 6 91978957 to 91978983 26 + TSS region transcription start site region 57776
Tssr57777 6 91983367 to 91983370 3 + TSS region transcription start site region 57777
Gm44095 6 92007550 to 92009480 1930 + unclassified gene predicted gene, 44095
Opfdc1 6 92012313 to 92012313 0 QTL open field distance from center 1
4930466I24Rik 6 92012394 to 92016117 3723 - antisense lncRNA gene RIKEN cDNA 4930466I24 gene
Tssr62103 6 92026448 to 92026450 2 - TSS region transcription start site region 62103
D6Mit100 6 92039950 to 92040033 83 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 100
Idd20 6 92039950 to 92716697 676747 QTL insulin dependent diabetes susceptibility 20
Cpgi17746 6 92090832 to 92092602 1770 CpG island CpG island 17746
Tssr57778 6 92091378 to 92091389 11 + TSS region transcription start site region 57778
Tssr57779 6 92091405 to 92091423 18 + TSS region transcription start site region 57779
Nr2c2 6 92091418 to 92173058 81640 + protein coding gene nuclear receptor subfamily 2, group C, member 2
Tssr57780 6 92091436 to 92091466 30 + TSS region transcription start site region 57780
Tssr57781 6 92091495 to 92091506 11 + TSS region transcription start site region 57781
Tssr57782 6 92091512 to 92091523 11 + TSS region transcription start site region 57782
Tssr57783 6 92091528 to 92091537 9 + TSS region transcription start site region 57783
Tssr57784 6 92091546 to 92091557 11 + TSS region transcription start site region 57784
Tssr57785 6 92092328 to 92092334 6 + TSS region transcription start site region 57785
Tssr57786 6 92092369 to 92092419 50 + TSS region transcription start site region 57786
Tssr57787 6 92103658 to 92103662 4 + TSS region transcription start site region 57787
Tssr57788 6 92136849 to 92136853 4 + TSS region transcription start site region 57788
Gm44249 6 92144489 to 92146293 1804 - unclassified gene predicted gene, 44249
Gm46967 6 92151011 to 92157410 6399 - lncRNA gene predicted gene, 46967
Tssr57789 6 92156978 to 92156982 4 + TSS region transcription start site region 57789
9430019H13Rik 6 92165991 to 92167015 1024 unclassified gene RIKEN cDNA 9430019H13 gene
Mrps25 6 92169525 to 92184033 14508 - protein coding gene mitochondrial ribosomal protein S25
Tssr62104 6 92177452 to 92177456 4 - TSS region transcription start site region 62104
Cpgi17747 6 92183532 to 92184275 743 CpG island CpG island 17747
Tssr62105 6 92183972 to 92184038 66 - TSS region transcription start site region 62105
Rbsn 6 92186712 to 92214904 28192 - protein coding gene rabenosyn, RAB effector
Cpgi17748 6 92214050 to 92215115 1065 CpG island CpG island 17748
Tssr62106 6 92214843 to 92214877 34 - TSS region transcription start site region 62106
Tssr62107 6 92214897 to 92214906 9 - TSS region transcription start site region 62107
D6Mit362.1 6 92236417 to 92236579 162 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 362.1
D6Mit362 6 92236561 to 92236675 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 362
Trh 6 92242061 to 92244650 2589 - protein coding gene thyrotropin releasing hormone
Tssr62108 6 92242461 to 92242472 11 - TSS region transcription start site region 62108
Tssr62109 6 92242672 to 92242708 36 - TSS region transcription start site region 62109
Tssr62110 6 92242741 to 92242757 16 - TSS region transcription start site region 62110
Tssr62111 6 92242891 to 92242905 14 - TSS region transcription start site region 62111
Cpgi17749 6 92244292 to 92245001 709 CpG island CpG island 17749
Tssr62112 6 92244645 to 92244649 4 - TSS region transcription start site region 62112
Tssr62113 6 92246380 to 92246416 36 - TSS region transcription start site region 62113
Gm30688 6 92269224 to 92315813 46589 + lncRNA gene predicted gene, 30688
Gm44803 6 92271417 to 92271572 155 - pseudogene predicted gene 44803
Gm44024 6 92280918 to 92281393 475 - pseudogene predicted gene, 44024
Tssr57790 6 92306105 to 92306113 8 + TSS region transcription start site region 57790
Prickle2 6 92370908 to 92706155 335247 - protein coding gene prickle planar cell polarity protein 2
Cpgi17750 6 92376072 to 92376642 570 CpG island CpG island 17750
Gm38862 6 92403581 to 92422323 18742 + lncRNA gene predicted gene, 38862
Tssr62114 6 92418055 to 92418058 3 - TSS region transcription start site region 62114
Gm38861 6 92422455 to 92424686 2231 + lncRNA gene predicted gene, 38861
Tssr62115 6 92427261 to 92427264 3 - TSS region transcription start site region 62115