Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:91494232-91710514

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xpc 6 91489305 to 91515888 26583 - protein coding gene xeroderma pigmentosum, complementation group C
Cpgi17739 6 91515281 to 91516435 1154 CpG island CpG island 17739
Tssr62088 6 91515796 to 91515859 63 - TSS region transcription start site region 62088
Tssr62089 6 91515878 to 91515889 11 - TSS region transcription start site region 62089
Tssr57725 6 91515969 to 91515993 24 + TSS region transcription start site region 57725
Tssr57726 6 91516006 to 91516058 52 + TSS region transcription start site region 57726
Lsm3 6 91516035 to 91522620 6585 + protein coding gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
Gm45216 6 91522409 to 91532379 9970 + sense overlapping lncRNA gene predicted gene 45216
D6Mit1005 6 91550615 to 91550724 109 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 1005
Cpgi17740 6 91577017 to 91577206 189 CpG island CpG island 17740
Gm45215 6 91594758 to 91595152 394 + pseudogene predicted gene 45215
Gm45218 6 91599232 to 91605514 6282 + lincRNA gene predicted gene 45218
Gm40387 6 91660736 to 91679676 18940 + lncRNA gene predicted gene, 40387
Gm30628 6 91663408 to 91679617 16209 - lncRNA gene predicted gene, 30628
Tssr62090 6 91668502 to 91668521 19 - TSS region transcription start site region 62090
Tssr62091 6 91668537 to 91668545 8 - TSS region transcription start site region 62091
Gm45217 6 91678198 to 91679223 1025 - unclassified gene predicted gene 45217
Tssr57727 6 91683594 to 91683644 50 + TSS region transcription start site region 57727
Cpgi17741 6 91683598 to 91684811 1213 CpG island CpG island 17741
Slc6a6 6 91684053 to 91759066 75013 + protein coding gene solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Tssr57728 6 91684061 to 91684132 71 + TSS region transcription start site region 57728
Tssr57729 6 91684177 to 91684191 14 + TSS region transcription start site region 57729
4930517G19Rik 6 91689933 to 91691608 1675 - unclassified gene RIKEN cDNA 4930517G19 gene
Tssr57730 6 91690393 to 91690440 47 + TSS region transcription start site region 57730
Tssr62092 6 91692726 to 91692727 1 - TSS region transcription start site region 62092
Tssr57731 6 91699109 to 91699121 12 + TSS region transcription start site region 57731
Tssr57732 6 91699138 to 91699155 17 + TSS region transcription start site region 57732
Tssr57733 6 91701649 to 91701662 13 + TSS region transcription start site region 57733
Tssr57734 6 91705804 to 91705832 28 + TSS region transcription start site region 57734
Tssr57735 6 91705850 to 91705879 29 + TSS region transcription start site region 57735
Tssr1938 6 91706257 to 91706267 10 - TSS region transcription start site region 1938
Gm45828 6 91709406 to 91711241 1835 + unclassified gene predicted gene 45828
Tssr57736 6 91709441 to 91709451 10 + TSS region transcription start site region 57736