Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:87755261-87825271

Filter by:
22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efcc1 6 87730869 to 87755908 25039 + protein coding gene EF hand and coiled-coil domain containing 1
Gm5879 6 87764996 to 87766204 1208 - pseudogene predicted gene 5879
Tssr57550 6 87776129 to 87776149 20 + TSS region transcription start site region 57550
Gm43904 6 87776143 to 87777480 1337 + lincRNA gene predicted gene, 43904
Tssr57551 6 87778064 to 87778082 18 + TSS region transcription start site region 57551
Gp9 6 87778072 to 87779768 1696 + protein coding gene glycoprotein 9 (platelet)
Tssr57552 6 87778084 to 87778112 28 + TSS region transcription start site region 57552
Rab43 6 87788853 to 87812164 23311 - protein coding gene RAB43, member RAS oncogene family
Gm45140 6 87788861 to 87835795 46934 - protein coding gene predicted gene 45140
Tssr61935 6 87790261 to 87790271 10 - TSS region transcription start site region 61935
Tssr1926 6 87791448 to 87791463 15 - TSS region transcription start site region 1926
Gm44423 6 87796070 to 87799227 3157 - unclassified gene predicted gene, 44423
9930120I10Rik 6 87805472 to 87806336 864 - unclassified gene RIKEN cDNA 9930120I10 gene
Tssr61936 6 87807539 to 87807576 37 - TSS region transcription start site region 61936
Tssr61937 6 87809769 to 87809787 18 - TSS region transcription start site region 61937
Tssr61938 6 87809792 to 87809814 22 - TSS region transcription start site region 61938
Cpgi17681 6 87810854 to 87812555 1701 CpG island CpG island 17681
Tssr57553 6 87810967 to 87810982 15 + TSS region transcription start site region 57553
Tssr61939 6 87811652 to 87811667 15 - TSS region transcription start site region 61939
Tssr61940 6 87811771 to 87811802 31 - TSS region transcription start site region 61940
Tssr61941 6 87811810 to 87811842 32 - TSS region transcription start site region 61941
Isy1 6 87818447 to 87838759 20312 - protein coding gene ISY1 splicing factor homolog