Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:87685273-87805300

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1810020O05Rik 6 87675593 to 87690847 15254 - lincRNA gene Riken cDNA 1810020O05 gene
Tssr61927 6 87690819 to 87690852 33 - TSS region transcription start site region 61927
D6Mit228 6 87713684 to 87713789 105 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 228
Tssr61928 6 87722741 to 87722755 14 - TSS region transcription start site region 61928
Tssr61929 6 87722761 to 87722780 19 - TSS region transcription start site region 61929
Tssr61930 6 87722786 to 87722801 15 - TSS region transcription start site region 61930
Gm44210 6 87729964 to 87731148 1184 - antisense lncRNA gene predicted gene, 44210
Cpgi17679 6 87730376 to 87732043 1667 CpG island CpG island 17679
Efcc1 6 87730869 to 87755908 25039 + protein coding gene EF hand and coiled-coil domain containing 1
Tssr61931 6 87731438 to 87731472 34 - TSS region transcription start site region 61931
Tssr61932 6 87731498 to 87731533 35 - TSS region transcription start site region 61932
Cpgi17680 6 87732367 to 87733173 806 CpG island CpG island 17680
Tssr57548 6 87732557 to 87732594 37 + TSS region transcription start site region 57548
Gm34414 6 87741036 to 87749187 8151 - lncRNA gene predicted gene, 34414
Tssr57549 6 87742326 to 87742339 13 + TSS region transcription start site region 57549
Tssr61933 6 87745036 to 87745047 11 - TSS region transcription start site region 61933
Tssr61934 6 87745273 to 87745300 27 - TSS region transcription start site region 61934
Gm5879 6 87764996 to 87766204 1208 - pseudogene predicted gene 5879
Tssr57550 6 87776129 to 87776149 20 + TSS region transcription start site region 57550
Gm43904 6 87776143 to 87777480 1337 + lincRNA gene predicted gene, 43904
Tssr57551 6 87778064 to 87778082 18 + TSS region transcription start site region 57551
Gp9 6 87778072 to 87779768 1696 + protein coding gene glycoprotein 9 (platelet)
Tssr57552 6 87778084 to 87778112 28 + TSS region transcription start site region 57552
Rab43 6 87788853 to 87812164 23311 - protein coding gene RAB43, member RAS oncogene family
Gm45140 6 87788861 to 87835795 46934 - protein coding gene predicted gene 45140
Tssr61935 6 87790261 to 87790271 10 - TSS region transcription start site region 61935
Tssr1926 6 87791448 to 87791463 15 - TSS region transcription start site region 1926
Gm44423 6 87796070 to 87799227 3157 - unclassified gene predicted gene, 44423