Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:87566986-87709836

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prokr1 6 87578591 to 87590743 12152 - protein coding gene prokineticin receptor 1
Tssr61922 6 87579925 to 87579938 13 - TSS region transcription start site region 61922
Cpgi17676 6 87581243 to 87581892 649 CpG island CpG island 17676
Gm34222 6 87581853 to 87587796 5943 + lncRNA gene predicted gene, 34222
Cpgi17677 6 87590486 to 87591121 635 CpG island CpG island 17677
Tssr61923 6 87590708 to 87590748 40 - TSS region transcription start site region 61923
Gm34312 6 87597557 to 87598911 1354 + lincRNA gene predicted gene, 34312
Aplf 6 87628424 to 87672193 43769 - protein coding gene aprataxin and PNKP like factor
Gm46964 6 87636986 to 87639836 2850 + lncRNA gene predicted gene, 46964
Gm38852 6 87651089 to 87653700 2611 - lncRNA gene predicted gene, 38852
Tssr57546 6 87657748 to 87657759 11 + TSS region transcription start site region 57546
Gm44097 6 87657754 to 87663823 6069 + antisense lncRNA gene predicted gene, 44097
Tssr57547 6 87657777 to 87657784 7 + TSS region transcription start site region 57547
Cpgi17678 6 87671763 to 87672116 353 CpG island CpG island 17678
Tssr61924 6 87672121 to 87672138 17 - TSS region transcription start site region 61924
Tssr61925 6 87672142 to 87672179 37 - TSS region transcription start site region 61925
Tssr61926 6 87672190 to 87672202 12 - TSS region transcription start site region 61926
1810020O05Rik 6 87675593 to 87690847 15254 - lincRNA gene Riken cDNA 1810020O05 gene
E230015B07Rik 6 87675832 to 87681094 5262 + bidirectional promoter lncRNA gene RIKEN cDNA E230015B07 gene
Tssr61927 6 87690819 to 87690852 33 - TSS region transcription start site region 61927