Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:86789315-87009438

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Anxa4 6 86736840 to 86793584 56744 - protein coding gene annexin A4
Tssr61863 6 86790129 to 86790133 4 - TSS region transcription start site region 61863
Tssr57508 6 86790721 to 86790734 13 + TSS region transcription start site region 57508
Cpgi17670 6 86792932 to 86793873 941 CpG island CpG island 17670
Tssr61864 6 86793522 to 86793582 60 - TSS region transcription start site region 61864
Tssr61865 6 86793590 to 86793601 11 - TSS region transcription start site region 61865
Tssr61866 6 86795692 to 86795733 41 - TSS region transcription start site region 61866
Tssr61867 6 86796568 to 86796585 17 - TSS region transcription start site region 61867
D6Mit29 6 86806805 to 86806927 122 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 29
D6Dcr21 6 86806828 to 86806926 98 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 21
2610306M01Rik 6 86848407 to 86849440 1033 - bidirectional promoter lncRNA gene RIKEN cDNA 2610306M01 gene
Cpgi17671 6 86848645 to 86850315 1670 CpG island CpG island 17671
Tssr57509 6 86849266 to 86849335 69 + TSS region transcription start site region 57509
Tssr57510 6 86849443 to 86849454 11 + TSS region transcription start site region 57510
Tssr57511 6 86849488 to 86849594 106 + TSS region transcription start site region 57511
Aak1 6 86849517 to 87003223 153706 + protein coding gene AP2 associated kinase 1
Tssr57512 6 86850892 to 86850910 18 + TSS region transcription start site region 57512
Tssr57513 6 86850922 to 86850933 11 + TSS region transcription start site region 57513
Gm44153 6 86862873 to 86864452 1579 + unclassified gene predicted gene, 44153
Tssr57514 6 86864927 to 86864931 4 + TSS region transcription start site region 57514
Tssr57515 6 86870810 to 86870813 3 + TSS region transcription start site region 57515
Gm44152 6 86873786 to 86875476 1690 + unclassified gene predicted gene, 44152
D6Mit323 6 86899315 to 86899438 123 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 323
Tssr57516 6 86943243 to 86943251 8 + TSS region transcription start site region 57516
Tssr57517 6 86946858 to 86946881 23 + TSS region transcription start site region 57517
Tssr57518 6 86946919 to 86946942 23 + TSS region transcription start site region 57518
Tssr57519 6 86949538 to 86949563 25 + TSS region transcription start site region 57519
Tssr57520 6 86955143 to 86955180 37 + TSS region transcription start site region 57520
Tssr57521 6 86955223 to 86955230 7 + TSS region transcription start site region 57521
Gm44093 6 86961641 to 86963442 1801 + unclassified gene predicted gene, 44093
Gm44091 6 86976529 to 86977177 648 + sense intronic lncRNA gene predicted gene, 44091
Gm38495 6 86994977 to 87003227 8250 + protein coding gene predicted gene, 38495
Tssr57522 6 87009230 to 87009253 23 + TSS region transcription start site region 57522
Nfu1 6 87009291 to 87028461 19170 + protein coding gene NFU1 iron-sulfur cluster scaffold
Mnic2 6 113544602 to 86806805 -26737797 QTL macronutrient intake, carbohydrate 2