Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:85568515-85918609

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17650 6 85587289 to 85588253 964 CpG island CpG island 17650
Tssr57424 6 85587505 to 85587516 11 + TSS region transcription start site region 57424
Tssr57425 6 85587524 to 85587544 20 + TSS region transcription start site region 57425
Alms1 6 85587531 to 85702753 115222 + protein coding gene ALMS1, centrosome and basal body associated
Tssr57426 6 85587562 to 85587573 11 + TSS region transcription start site region 57426
Tssr57427 6 85587591 to 85587630 39 + TSS region transcription start site region 57427
Gm43588 6 85632864 to 85635161 2297 + unclassified gene predicted gene 43588
Gm42600 6 85679277 to 85682864 3587 + unclassified gene predicted gene 42600
Nat8f7 6 85706707 to 85709212 2505 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 7
Alms1-ps1 6 85721925 to 85756526 34601 + pseudogene ALMS1, centrosome and basal body associated, pseudogene 1
Gm27317 6 85743515 to 85743609 94 - miRNA gene predicted gene, 27317
Nat8f3 6 85760631 to 85765744 5113 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 3
Mir6375 6 85790140 to 85790234 94 - miRNA gene microRNA 6375
Alms1-ps2 6 85792117 to 85804057 11940 + pseudogene ALMS1, centrosome and basal body associated, pseudogene 2
Nat8f6 6 85808044 to 85809877 1833 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 6
Nat8f5 6 85817218 to 85820972 3754 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 5
Tssr61760 6 85820936 to 85820962 26 - TSS region transcription start site region 61760
Tssr61761 6 85820965 to 85820977 12 - TSS region transcription start site region 61761
Tssr61762 6 85820981 to 85820990 9 - TSS region transcription start site region 61762
Tssr61763 6 85821001 to 85821007 6 - TSS region transcription start site region 61763
Nat8 6 85830388 to 85832082 1694 - protein coding gene N-acetyltransferase 8 (GCN5-related)
Tssr61764 6 85831825 to 85831859 34 - TSS region transcription start site region 61764
Tssr61765 6 85832219 to 85832232 13 - TSS region transcription start site region 61765
Tssr61766 6 85832239 to 85832263 24 - TSS region transcription start site region 61766
Tssr1916 6 85832269 to 85832281 12 - TSS region transcription start site region 1916
Ptges3-ps 6 85843980 to 85844459 479 + pseudogene prostaglandin E synthase 3, pseudogene
Gm38847 6 85856311 to 85861133 4822 + lncRNA gene predicted gene, 38847
Nat8f2 6 85865422 to 85869137 3715 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 2
Tssr61767 6 85865808 to 85865810 2 - TSS region transcription start site region 61767
Tssr61768 6 85865882 to 85865894 12 - TSS region transcription start site region 61768
Tssr61769 6 85867424 to 85867435 11 - TSS region transcription start site region 61769
Tssr61770 6 85869056 to 85869067 11 - TSS region transcription start site region 61770
Tssr61771 6 85869082 to 85869100 18 - TSS region transcription start site region 61771
Tssr61772 6 85869107 to 85869123 16 - TSS region transcription start site region 61772
Tssr61773 6 85869128 to 85869143 15 - TSS region transcription start site region 61773
Tssr57428 6 85889309 to 85889311 2 + TSS region transcription start site region 57428
Gm43309 6 85889326 to 85889961 635 + pseudogene predicted gene 43309
Cpgi17651 6 85895402 to 85895555 153 CpG island CpG island 17651
Nat8f4 6 85899051 to 85904884 5833 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 4
Tssr61774 6 85902246 to 85902276 30 - TSS region transcription start site region 61774
Tssr61775 6 85902528 to 85902538 10 - TSS region transcription start site region 61775
Cpgi17652 6 85904854 to 85905052 198 CpG island CpG island 17652
Nat8f1 6 85910154 to 85915677 5523 - protein coding gene N-acetyltransferase 8 (GCN5-related) family member 1
Tssr57429 6 85911854 to 85911865 11 + TSS region transcription start site region 57429
Tprkb 6 85911865 to 85930284 18419 + protein coding gene Tp53rk binding protein
Tssr57430 6 85911867 to 85911885 18 + TSS region transcription start site region 57430
Cpgi17653 6 85915591 to 85916489 898 CpG island CpG island 17653
Tssr61776 6 85915618 to 85915640 22 - TSS region transcription start site region 61776
Tssr61777 6 85915653 to 85915692 39 - TSS region transcription start site region 61777
Tssr57431 6 85915709 to 85915770 61 + TSS region transcription start site region 57431
Tssr57432 6 85915787 to 85915798 11 + TSS region transcription start site region 57432