Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:85290098-85450109

Filter by:
25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sfxn5 6 85213049 to 85333422 120373 - protein coding gene sideroflexin 5
Tssr57413 6 85298490 to 85298495 5 + TSS region transcription start site region 57413
Cpgi17641 6 85332367 to 85334019 1652 CpG island CpG island 17641
Tssr57414 6 85332564 to 85332566 2 + TSS region transcription start site region 57414
Tssr61744 6 85333412 to 85333441 29 - TSS region transcription start site region 61744
Tssr61745 6 85333478 to 85333489 11 - TSS region transcription start site region 61745
Rab11fip5 6 85334962 to 85374634 39672 - protein coding gene RAB11 family interacting protein 5 (class I)
Mir705 6 85336292 to 85336373 81 - miRNA gene microRNA 705
Tssr61746 6 85370098 to 85370109 11 - TSS region transcription start site region 61746
Cpgi17642 6 85373879 to 85375206 1327 CpG island CpG island 17642
Tssr1914 6 85374424 to 85374445 21 - TSS region transcription start site region 1914
Tssr61747 6 85374542 to 85374553 11 - TSS region transcription start site region 61747
Tssr61748 6 85374574 to 85374579 5 - TSS region transcription start site region 61748
Tssr61749 6 85374583 to 85374592 9 - TSS region transcription start site region 61749
Tssr61750 6 85374606 to 85374664 58 - TSS region transcription start site region 61750
Tssr61751 6 85374679 to 85374704 25 - TSS region transcription start site region 61751
Cpgi17643 6 85409104 to 85409442 338 CpG island CpG island 17643
Noto 6 85423886 to 85428877 4991 + protein coding gene notochord homeobox
Cpgi17644 6 85423985 to 85424381 396 CpG island CpG island 17644
Cpgi17645 6 85431764 to 85432433 669 CpG island CpG island 17645
Tssr57415 6 85431970 to 85432010 40 + TSS region transcription start site region 57415
Smyd5 6 85431989 to 85446435 14446 + protein coding gene SET and MYND domain containing 5
Tssr57416 6 85432011 to 85432045 34 + TSS region transcription start site region 57416
Tssr57417 6 85441705 to 85441716 11 + TSS region transcription start site region 57417
Pradc1 6 85446810 to 85451970 5160 - protein coding gene protease-associated domain containing 1