Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:73211797-75691904

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62 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dbts1 6 18234148 to 73387692 55153544 QTL diabetes 1
Hdp1 6 29751222 to 75544489 45793267 heritable phenotypic marker high doppler 1
Srilp 6 48726556 to 75447710 26721154 QTL sleep response to influenza, light phase
Is(In8B2-8B3.1;6C1)1Tshir 6 68148517 to 74207573 6059056 cytogenetic marker Insertion, Chr8 B2-B3.1 into Chr 6C1, Toshihiko Shiroishi 1
Dnah6 6 73017606 to 73221651 204045 - protein coding gene dynein, axonemal, heavy chain 6
Tssr61509 6 73221608 to 73221622 14 - TSS region transcription start site region 61509
Tssr61510 6 73221625 to 73221664 39 - TSS region transcription start site region 61510
Tssr61511 6 73221665 to 73221676 11 - TSS region transcription start site region 61511
Tssr61512 6 73221692 to 73221701 9 - TSS region transcription start site region 61512
Cpgi17559 6 73221698 to 73221903 205 CpG island CpG island 17559
Tssr61513 6 73221711 to 73221723 12 - TSS region transcription start site region 61513
Tssr57171 6 73223041 to 73223058 17 + TSS region transcription start site region 57171
Gm40377 6 73223050 to 73225064 2014 + lncRNA gene predicted gene, 40377
Cpgi17560 6 73248176 to 73249214 1038 CpG island CpG island 17560
Suclg1 6 73248505 to 73276907 28402 + protein coding gene succinate-CoA ligase, GDP-forming, alpha subunit
Tssr57172 6 73248577 to 73248588 11 + TSS region transcription start site region 57172
Tssr57173 6 73248633 to 73248695 62 + TSS region transcription start site region 57173
Gm38834 6 73248760 to 73254494 5734 + lncRNA gene predicted gene, 38834
Gm40378 6 73287603 to 73289836 2233 - protein coding gene predicted gene, 40378
Gm44475 6 73310218 to 73310641 423 - pseudogene predicted gene, 44475
D6Mit186 6 73387511 to 73387692 181 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 186
Gm24370 6 73392142 to 73392243 101 + miRNA gene predicted gene, 24370
Olfr210-ps1 6 73420317 to 73421218 901 - pseudogene olfactory receptor 210, pseudogene 1
Cpgi17561 6 73429533 to 73430069 536 CpG island CpG island 17561
1700065L07Rik 6 73436986 to 73471021 34035 - lincRNA gene RIKEN cDNA 1700065L07 gene
4931417E11Rik 6 73468573 to 73469667 1094 - protein coding gene RIKEN cDNA 4931417E11 gene
Tssr61514 6 73469466 to 73469473 7 - TSS region transcription start site region 61514
Tssr61515 6 73469510 to 73469521 11 - TSS region transcription start site region 61515
Tssr61516 6 73469577 to 73469647 70 - TSS region transcription start site region 61516
Tssr61517 6 73471064 to 73471075 11 - TSS region transcription start site region 61517
Gm4374 6 73528815 to 73529238 423 - pseudogene predicted gene 4374
Gm31747 6 73586109 to 73608673 22564 - lincRNA gene predicted gene, 31747
Tssr61518 6 73608667 to 73608675 8 - TSS region transcription start site region 61518
Tssr57174 6 73633098 to 73633105 7 + TSS region transcription start site region 57174
D6Mit245 6 73745001 to 73745123 122 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 245
Gm44225 6 73885664 to 73885849 185 - pseudogene predicted gene, 44225
Tssr61519 6 74025745 to 74025746 1 - TSS region transcription start site region 61519
Tssr57175 6 74050232 to 74050234 2 + TSS region transcription start site region 57175
D6Mit126 6 74055234 to 74055321 87 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 126
D6Mit320.1 6 74207306 to 74207421 115 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 320.1
D6Mit320 6 74207453 to 74207573 120 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 320
D6Mit358 6 74267639 to 74267756 117 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 358
Gm26179 6 74340950 to 74341081 131 + snoRNA gene predicted gene, 26179
Gm23924 6 74451797 to 74451904 107 - snRNA gene predicted gene, 23924
Gm22254 6 74505055 to 74505164 109 - miRNA gene predicted gene, 22254
Gm8992 6 75187667 to 75188168 501 - pseudogene predicted gene 8992
Gm8993 6 75202071 to 75202839 768 + pseudogene predicted gene 8993
Gm6210 6 75296118 to 75298059 1941 - pseudogene predicted gene 6210
Tssr61520 6 75298138 to 75298145 7 - TSS region transcription start site region 61520
Gm8999 6 75383064 to 75384021 957 - pseudogene predicted gene 8999
Gm38835 6 75427450 to 75474984 47534 - lncRNA gene predicted gene, 38835
D6Dcr17 6 75447582 to 75447699 117 DNA segment DNA Segment, Chr 6, Derry C. Roopenian 17
D6Mit188 6 75447583 to 75447710 127 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 188
Skmw10 6 75447583 to 75447710 127 QTL skeletal muscle weight 10
Obq28 6 75540433 to 75540433 0 QTL obesity QTL 28
Efw 6 75544356 to 94225955 18681599 QTL epididymal fat weight
Arrd1 6 75544356 to 92607450 17063094 QTL age-related retinal degeneration 1
D6Mit209 6 75544356 to 75544489 133 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 209
Nidd3n 6 75544356 to 94225955 18681599 QTL non-insulin-dependent diabetes mellitus 3 in NSY
4933439N06Rik 6 75572094 to 75573458 1364 - unclassified gene RIKEN cDNA 4933439N06 gene
Ots1 6 104503555 to 75447583 -29055972 QTL ovarian teratoma susceptibility 1
Recrq9 6 134700000 to 73500000 -61200000 QTL recombination rate in male meiosis QTL 9