Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:72572529-72682552

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elmod3 6 72565922 to 72598413 32491 - protein coding gene ELMO/CED-12 domain containing 3
Cpgi17548 6 72598124 to 72598970 846 CpG island CpG island 17548
Tssr61470 6 72598330 to 72598368 38 - TSS region transcription start site region 61470
Tssr61471 6 72598381 to 72598424 43 - TSS region transcription start site region 61471
Tssr57150 6 72598594 to 72598609 15 + TSS region transcription start site region 57150
Retsat 6 72598628 to 72607488 8860 + protein coding gene retinol saturase (all trans retinol 13,14 reductase)
Gm45053 6 72603004 to 72605502 2498 - unclassified gene predicted gene 45053
Tssr57151 6 72606391 to 72606394 3 + TSS region transcription start site region 57151
Tgoln1 6 72608432 to 72617000 8568 - protein coding gene trans-golgi network protein
Gm20536 6 72609836 to 72616190 6354 + unclassified non-coding RNA gene predicted gene 20536
Tssr61472 6 72610251 to 72610255 4 - TSS region transcription start site region 61472
Tssr61473 6 72610436 to 72610449 13 - TSS region transcription start site region 61473
Tssr61474 6 72610510 to 72610532 22 - TSS region transcription start site region 61474
Tssr61475 6 72610592 to 72610600 8 - TSS region transcription start site region 61475
Tssr61476 6 72611016 to 72611037 21 - TSS region transcription start site region 61476
Tssr61477 6 72611396 to 72611408 12 - TSS region transcription start site region 61477
Cpgi17549 6 72616138 to 72617195 1057 CpG island CpG island 17549
Tssr61478 6 72616725 to 72616756 31 - TSS region transcription start site region 61478
Tssr57152 6 72616855 to 72616918 63 + TSS region transcription start site region 57152
Tcf7l1 6 72626371 to 72789045 162674 - protein coding gene transcription factor 7 like 1 (T cell specific, HMG box)
Tssr61479 6 72627007 to 72627024 17 - TSS region transcription start site region 61479
Tssr57153 6 72627529 to 72627552 23 + TSS region transcription start site region 57153
Tssr57154 6 72629284 to 72629304 20 + TSS region transcription start site region 57154
Gm15401 6 72629288 to 72637717 8429 + antisense lncRNA gene predicted gene 15401
Tssr61480 6 72630550 to 72630559 9 - TSS region transcription start site region 61480
Gm37969 6 72635147 to 72638555 3408 - unclassified gene predicted gene, 37969
Tssr57155 6 72636226 to 72636237 11 + TSS region transcription start site region 57155
Tssr57156 6 72636244 to 72636258 14 + TSS region transcription start site region 57156
Tssr57157 6 72636268 to 72636281 13 + TSS region transcription start site region 57157
Tssr57158 6 72636288 to 72636321 33 + TSS region transcription start site region 57158
Tssr57159 6 72636327 to 72636332 5 + TSS region transcription start site region 57159
Tssr57160 6 72636375 to 72636378 3 + TSS region transcription start site region 57160
Gm38114 6 72642854 to 72644085 1231 - unclassified gene predicted gene, 38114
Gm31391 6 72645556 to 72686530 40974 + lncRNA gene predicted gene, 31391
Gm38320 6 72652320 to 72653600 1280 + unclassified gene predicted gene, 38320