Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:71809053-72079435

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Reep1 6 71707681 to 71810710 103029 + protein coding gene receptor accessory protein 1
Tssr57043 6 71809410 to 71809434 24 + TSS region transcription start site region 57043
Mrpl35 6 71812997 to 71823784 10787 - protein coding gene mitochondrial ribosomal protein L35
Cpgi17530 6 71823553 to 71823947 394 CpG island CpG island 17530
Tssr61395 6 71823708 to 71823713 5 - TSS region transcription start site region 61395
Tssr61396 6 71823756 to 71823793 37 - TSS region transcription start site region 61396
Tssr61397 6 71823805 to 71823814 9 - TSS region transcription start site region 61397
Tssr61398 6 71830697 to 71830701 4 - TSS region transcription start site region 61398
Tssr61399 6 71830858 to 71830866 8 - TSS region transcription start site region 61399
Cpgi17531 6 71831008 to 71831929 921 CpG island CpG island 17531
Gm44771 6 71831085 to 71831710 625 - unclassified gene predicted gene 44771
Immt 6 71831090 to 71875266 44176 + protein coding gene inner membrane protein, mitochondrial
Tssr61400 6 71831170 to 71831200 30 - TSS region transcription start site region 61400
Tssr57044 6 71831325 to 71831410 85 + TSS region transcription start site region 57044
Tssr57045 6 71831426 to 71831437 11 + TSS region transcription start site region 57045
Tssr57046 6 71831441 to 71831452 11 + TSS region transcription start site region 57046
Gm17825 6 71869212 to 71870005 793 - pseudogene predicted gene, 17825
Ptcd3 6 71880638 to 71908750 28112 - protein coding gene pentatricopeptide repeat domain 3
Tssr61401 6 71881169 to 71881171 2 - TSS region transcription start site region 61401
Gm22486 6 71882557 to 71882693 136 - snoRNA gene predicted gene, 22486
Tssr61402 6 71888782 to 71888783 1 - TSS region transcription start site region 61402
Cpgi17532 6 71908471 to 71909263 792 CpG island CpG island 17532
Tssr61403 6 71908736 to 71908770 34 - TSS region transcription start site region 61403
Tssr57047 6 71909036 to 71909043 7 + TSS region transcription start site region 57047
Tssr57048 6 71909046 to 71909076 30 + TSS region transcription start site region 57048
Polr1a 6 71909053 to 71979435 70382 + protein coding gene polymerase (RNA) I polypeptide A
Tssr57049 6 71912234 to 71912252 18 + TSS region transcription start site region 57049
Gm19078 6 71918901 to 71919844 943 - pseudogene predicted gene, 19078
Tssr57050 6 71926079 to 71926110 31 + TSS region transcription start site region 57050
Tssr57051 6 71936008 to 71936040 32 + TSS region transcription start site region 57051
Gm26628 6 71961145 to 71963775 2630 - antisense lncRNA gene predicted gene, 26628
Tssr61404 6 72010163 to 72010166 3 - TSS region transcription start site region 61404
9130221F21Rik 6 72013896 to 72042528 28632 - lincRNA gene RIKEN cDNA 9130221F21 gene
Tssr61405 6 72042517 to 72042533 16 - TSS region transcription start site region 61405
Tssr61406 6 72042537 to 72042540 3 - TSS region transcription start site region 61406
Tssr61407 6 72042544 to 72042560 16 - TSS region transcription start site region 61407
Tssr61408 6 72042569 to 72042572 3 - TSS region transcription start site region 61408
D6Mit319 6 72059944 to 72060063 119 DNA segment DNA Segment, Chr 6, Massachusetts Institute of Technology 319
Gm8952 6 72073055 to 72074153 1098 - pseudogene predicted gene 8952