Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:71492136-71792138

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43 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17525 6 71493453 to 71495004 1551 CpG island CpG island 17525
Tssr57028 6 71493850 to 71493918 68 + TSS region transcription start site region 57028
Rnf103 6 71493894 to 71510881 16987 + protein coding gene ring finger protein 103
Tssr57029 6 71494055 to 71494073 18 + TSS region transcription start site region 57029
Tssr57030 6 71494074 to 71494085 11 + TSS region transcription start site region 57030
Tssr61384 6 71502830 to 71502838 8 - TSS region transcription start site region 61384
Gm38830 6 71533219 to 71537869 4650 + lncRNA gene predicted gene, 38830
Gm44194 6 71538510 to 71541738 3228 - unclassified gene predicted gene, 44194
1700040L08Rik 6 71543192 to 71544114 922 - antisense lncRNA gene RIKEN cDNA 1700040L08 gene
Cpgi17526 6 71543742 to 71544619 877 CpG island CpG island 17526
Tssr57031 6 71543843 to 71543868 25 + TSS region transcription start site region 57031
Chmp3 6 71543854 to 71581579 37725 + protein coding gene charged multivesicular body protein 3
Tssr57032 6 71543871 to 71543898 27 + TSS region transcription start site region 57032
Tssr57033 6 71543900 to 71543957 57 + TSS region transcription start site region 57033
Tssr57034 6 71543975 to 71543986 11 + TSS region transcription start site region 57034
Tssr57035 6 71544342 to 71544367 25 + TSS region transcription start site region 57035
Tssr57036 6 71545233 to 71545240 7 + TSS region transcription start site region 57036
Tssr61385 6 71555762 to 71555772 10 - TSS region transcription start site region 61385
Kdm3a 6 71588972 to 71632990 44018 - protein coding gene lysine (K)-specific demethylase 3A
Tssr61386 6 71608129 to 71608177 48 - TSS region transcription start site region 61386
Tssr61387 6 71609045 to 71609081 36 - TSS region transcription start site region 61387
Tssr61388 6 71609085 to 71609108 23 - TSS region transcription start site region 61388
Cpgi17527 6 71632025 to 71633623 1598 CpG island CpG island 17527
Tssr61389 6 71632651 to 71632694 43 - TSS region transcription start site region 61389
Tssr61390 6 71632872 to 71632877 5 - TSS region transcription start site region 61390
Tssr61391 6 71632897 to 71632947 50 - TSS region transcription start site region 61391
Tssr61392 6 71632987 to 71632991 4 - TSS region transcription start site region 61392
Tssr61393 6 71633340 to 71633368 28 - TSS region transcription start site region 61393
Gm6063 6 71641612 to 71642096 484 - pseudogene predicted gene 6063
Tssr61394 6 71642136 to 71642138 2 - TSS region transcription start site region 61394
Gm44768 6 71672095 to 71672678 583 - pseudogene predicted gene 44768
Tssr57037 6 71683268 to 71683270 2 + TSS region transcription start site region 57037
Rpl19-ps9 6 71683298 to 71683885 587 + pseudogene ribosomal protein L19, pseudogene 9
Cpgi17528 6 71707020 to 71707204 184 CpG island CpG island 17528
Cpgi17529 6 71707431 to 71708759 1328 CpG island CpG island 17529
Reep1 6 71707681 to 71810710 103029 + protein coding gene receptor accessory protein 1
Tssr57038 6 71707826 to 71707837 11 + TSS region transcription start site region 57038
Tssr57039 6 71707861 to 71707878 17 + TSS region transcription start site region 57039
Tssr57040 6 71707889 to 71707907 18 + TSS region transcription start site region 57040
Tssr57041 6 71722827 to 71722829 2 + TSS region transcription start site region 57041
Tssr57042 6 71729858 to 71729862 4 + TSS region transcription start site region 57042
D6Mit143 6 71782185 to 71782314 129 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 143
Gm44769 6 71790668 to 71793476 2808 + unclassified gene predicted gene 44769