MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 6:70902733-71123487

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cia6c	6	44465871 to 71119467	26653596		QTL	collagen induced arthritis QTL 6c
Eif2ak3	6	70844515 to 70905245	60730	+	protein coding gene	eukaryotic translation initiation factor 2 alpha kinase 3
Tssr56980	6	70903708 to 70903715	7	+	TSS region	transcription start site region 56980
Tex37	6	70913087 to 70918927	5840	-	protein coding gene	testis expressed 37
Tssr61337	6	70918902 to 70918908	6	-	TSS region	transcription start site region 61337
Tssr61338	6	70918915 to 70918935	20	-	TSS region	transcription start site region 61338
Tssr61339	6	70951294 to 70951302	8	-	TSS region	transcription start site region 61339
Cpgi17516	6	70956179 to 70957401	1222		CpG island	CpG island 17516
Tssr56981	6	70956456 to 70956460	4	+	TSS region	transcription start site region 56981
Foxi3	6	70956606 to 70961066	4460	+	protein coding gene	forkhead box I3
Tssr56982	6	70965917 to 70965941	24	+	TSS region	transcription start site region 56982
Tssr56983	6	70968802 to 70968804	2	+	TSS region	transcription start site region 56983
Cpgi17517	6	71012733 to 71013487	754		CpG island	CpG island 17517
Gm23485	6	71039579 to 71039733	154	-	snRNA gene	predicted gene, 23485
Cpgi17518	6	71048517 to 71048820	303		CpG island	CpG island 17518
Cpgi17519	6	71048988 to 71049152	164		CpG island	CpG island 17519
Gm38826	6	71087777 to 71106633	18856	-	lncRNA gene	predicted gene, 38826
Gm43906	6	71105606 to 71106511	905	-	unclassified gene	predicted gene, 43906
D6Mit17	6	71119218 to 71119467	249		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 17