Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:56684905-56791912

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16 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lsm5 6 56701063 to 56704699 3636 - protein coding gene LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
Cpgi17478 6 56704182 to 56704858 676 CpG island CpG island 17478
Tssr61138 6 56704673 to 56704712 39 - TSS region transcription start site region 61138
4933427C19Rik 6 56714499 to 56715731 1232 unclassified gene RIKEN cDNA 4933427C19 gene
Cpgi17479 6 56714581 to 56715588 1007 CpG island CpG island 17479
Tssr56680 6 56714821 to 56714853 32 + TSS region transcription start site region 56680
Tssr56681 6 56714866 to 56714883 17 + TSS region transcription start site region 56681
Tssr56682 6 56714891 to 56714951 60 + TSS region transcription start site region 56682
Avl9 6 56714905 to 56761912 47007 + protein coding gene AVL9 cell migration associated
Tssr56683 6 56714958 to 56714971 13 + TSS region transcription start site region 56683
Tssr1859 6 56715006 to 56715015 9 + TSS region transcription start site region 1859
Tssr61139 6 56715452 to 56715468 16 - TSS region transcription start site region 61139
Tssr56684 6 56746548 to 56746559 11 + TSS region transcription start site region 56684
3110035G12Rik 6 56775823 to 56777345 1522 unclassified gene RIKEN cDNA 3110035G12 gene
Kbtbd2 6 56777524 to 56797813 20289 - protein coding gene kelch repeat and BTB (POZ) domain containing 2
Tssr61140 6 56784423 to 56784426 3 - TSS region transcription start site region 61140